RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CA4P22748 312 aa16.02■□□□□ 0.15
PCDHGB1-202ENST00000611598 QARSP47897 775 aaKnown RBP16.02■□□□□ 0.15
PCDHGB1-202ENST00000611598 ANO7Q6IWH7 933 aa16.02■□□□□ 0.15
PCDHGB1-202ENST00000611598 LDHDQ86WU2 507 aa16.02■□□□□ 0.15
PCDHGB1-202ENST00000611598 BBOF1Q8ND07 529 aa16.02■□□□□ 0.15
PCDHGB1-202ENST00000611598 TMEM161BQ8NDZ6 487 aa16.02■□□□□ 0.15
PCDHGB1-202ENST00000611598 CFAP57Q96MR6 1250 aa16.02■□□□□ 0.15
PCDHGB1-202ENST00000611598 ST6GALNAC4Q9H4F1 302 aa16.02■□□□□ 0.15
PCDHGB1-202ENST00000611598 DNPEPQ9ULA0 475 aa16.02■□□□□ 0.15
PCDHGB1-202ENST00000611598 LRRC42Q9Y546 428 aa16.02■□□□□ 0.15
PCDHGB1-202ENST00000611598 LIN7AO14910 233 aaPredicted RBP16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 DSG3P32926 999 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 NSFP46459 744 aaKnown RBP16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 SATB1Q01826 763 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 TAF1BQ53T94 588 aaPredicted RBP16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 DACT2Q5SW24 774 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 MON1BQ7L1V2 547 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 ARMC2Q8NEN0 867 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 LRRC8CQ8TDW0 803 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 INPP5DQ92835 1189 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 DENND2DQ9H6A0 471 aaPredicted RBP16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 VPS37BQ9H9H4 285 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 ZFATQ9P243 1243 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 LOXHD1Q8IVV2 1947 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 UBR3Q6ZT12 1888 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 ASTN2O75129 1339 aaPredicted RBP16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 ATP5HO75947 161 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 LUC7L3O95232 432 aaKnown RBP16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 CYP24A1Q07973 514 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 OTOAQ7RTW8 1153 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 RHOT1Q8IXI2 618 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 AGBL1Q96MI9 1066 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 SMC6Q96SB8 1091 aa16.01■□□□□ 0.15
PCDHGB1-202ENST00000611598 SCN9AQ15858 1988 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 DENND3A2RUS2 1198 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 DCTN3O75935 186 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 PDHA1P08559 390 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 NPTX2P47972 431 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 TUBP50607 506 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 IRX1P78414 480 aaPredicted RBP16■□□□□ 0.15
PCDHGB1-202ENST00000611598 PTP4A2Q12974 167 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 PLEKHG4Q58EX7 1191 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 RGS9BPQ6ZS82 235 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 BSNDQ8WZ55 320 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 MAK16Q9BXY0 300 aaKnown RBP16■□□□□ 0.15
PCDHGB1-202ENST00000611598 C12orf65Q9H3J6 166 aaKnown RBP16■□□□□ 0.15
PCDHGB1-202ENST00000611598 NPHS2Q9NP85 383 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 TMX2Q9Y320 296 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 DPPA5A6NC42 116 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 DNALI1O14645 258 aaPredicted RBP16■□□□□ 0.15
PCDHGB1-202ENST00000611598 PSTPIP1O43586 416 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 PTDSS1P48651 473 aaKnown RBP16■□□□□ 0.15
PCDHGB1-202ENST00000611598 TRAF1Q13077 416 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 SPOPLQ6IQ16 392 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 PODNQ7Z5L7 613 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 MAP4K3Q8IVH8 894 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 KATNAL2Q8IYT4 538 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 FAM81BQ96LP2 452 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 MFSD14AQ96MC6 490 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16■□□□□ 0.15
PCDHGB1-202ENST00000611598 UBN1Q9NPG3 1134 aa16■□□□□ 0.15
PCDHGB1-202ENST00000611598 NFIBO00712 420 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 LIASO43766 372 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 TYROBPO43914 113 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 ALDH3A1P30838 453 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 ARSEP51690 589 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 MCCD1P59942 119 aaPredicted RBP15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 NOP14P78316 857 aaKnown RBP15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 GCNT1Q02742 428 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 GPS1Q13098 491 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 MAMLD1Q13495 774 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 EFTUD2Q15029 972 aaKnown RBP eCLIP15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 XKR9Q5GH70 373 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 RFWD3Q6PCD5 774 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 LVRNQ6Q4G3 990 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 TDRPQ86YL5 185 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 CCDC125Q86Z20 511 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 ZBED8Q8IZ13 594 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 OGFOD1Q8N543 542 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 ZNF516Q92618 1163 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 HAUS1Q96CS2 278 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 MIPEPQ99797 713 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 AGO4Q9HCK5 861 aaKnown RBP15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 CYLDQ9NQC7 956 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 ZNF148Q9UQR1 794 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 WDR91A4D1P6 747 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 MAP3K13O43283 966 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 CYP1A1P04798 512 aaPredicted RBP15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 ATF7P17544 494 aaPredicted RBP15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 PCK1P35558 622 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 SNRPFP62306 86 aaKnown RBP15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 NR1H3Q13133 447 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 MAPK6Q16659 721 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 TKFCQ3LXA3 575 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 NLRP9Q7RTR0 991 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 MTDHQ86UE4 582 aaKnown RBP15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 TMC2Q8TDI7 906 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 ASAP3Q8TDY4 903 aa15.99■□□□□ 0.15
PCDHGB1-202ENST00000611598 ZNF75CPQ92670 426 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms