RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 NELFCDQ8IXH7 590 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 ZNF461Q8TAF7 563 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 ITFG1Q8TB96 612 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 ACSF2Q96CM8 615 aaPredicted RBP13.32□□□□□ -0.28
CTSA-210ENST00000606000 SPATA32Q96LK8 384 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 PGLYRP2Q96PD5 576 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 TMEM209Q96SK2 561 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 ASB7Q9H672 318 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 GDPD2Q9HCC8 539 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 DPP3Q9NY33 737 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 RBAKQ9NYW8 714 aaPredicted RBP13.32□□□□□ -0.28
CTSA-210ENST00000606000 DNMT3BQ9UBC3 853 aaKnown RBP13.32□□□□□ -0.28
CTSA-210ENST00000606000 KCNH3Q9ULD8 1083 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 DERAQ9Y315 318 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 COL4A3Q01955 1670 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 ANO9A1A5B4 782 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 H7C4K7 107 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
CTSA-210ENST00000606000 NARSO43776 548 aaKnown RBP13.31□□□□□ -0.28
CTSA-210ENST00000606000 ABLIM3O94929 683 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 VNN2O95498 520 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 CPB1P15086 417 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 GARTP22102 1010 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 FSHRP23945 695 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 HOXA9P31269 272 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 KRT85P78386 507 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 AMPD3Q01432 767 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 YWHAHQ04917 246 aaPredicted RBP13.31□□□□□ -0.28
CTSA-210ENST00000606000 ADCY1Q08828 1119 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 POSTNQ15063 836 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 LMBRD2Q68DH5 695 aaPredicted RBP13.31□□□□□ -0.28
CTSA-210ENST00000606000 CNNM4Q6P4Q7 775 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 UNC13DQ70J99 1090 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 APPL2Q8NEU8 664 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 ING5Q8WYH8 240 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 PBXIP1Q96AQ6 731 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 SENP8Q96LD8 212 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 LRRC27Q9C0I9 530 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 CRISPLD1Q9H336 500 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 TMEM206Q9H813 350 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 KCNK12Q9HB15 430 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 CYP4F11Q9HBI6 524 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 PDE11AQ9HCR9 933 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 SLC39A2Q9NP94 309 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 C2CD2Q9Y426 696 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 INSL5Q9Y5Q6 135 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 PTPRJQ12913 1337 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 NCOR1O75376 2440 aa13.31□□□□□ -0.28
CTSA-210ENST00000606000 PRRG1O14668 218 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 TGFB1I1O43294 461 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 KLRC4O43908 158 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 EXTL3O43909 919 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 ABCB7O75027 752 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 ATF2P15336 505 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 VCPP55072 806 aaKnown RBP13.3□□□□□ -0.28
CTSA-210ENST00000606000 TFAMQ00059 246 aaKnown RBP13.3□□□□□ -0.28
CTSA-210ENST00000606000 SLC5A9Q2M3M2 681 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 POTEHQ6S545 545 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 CBWD2Q8IUF1 395 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 CEP57L1Q8IYX8 460 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 GPD1LQ8N335 351 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 TTC9BQ8N6N2 239 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 OR10T2Q8NGX3 314 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 SCFD1Q8WVM8 642 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 PAGE5Q96GU1 130 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 TSPAN18Q96SJ8 248 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 PYM1Q9BRP8 204 aaKnown RBP13.3□□□□□ -0.28
CTSA-210ENST00000606000 GOLPH3LQ9H4A5 285 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 MAGEF1Q9HAY2 307 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 EPS15L1Q9UBC2 864 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 HPSEQ9Y251 543 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 HCN4Q9Y3Q4 1203 aa13.3□□□□□ -0.28
CTSA-210ENST00000606000 MYO10Q9HD67 2058 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 ARHGEF37A1IGU5 675 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 CLIC2O15247 247 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 EIF3DO15371 548 aaKnown RBP eCLIP13.29□□□□□ -0.28
CTSA-210ENST00000606000 XYLBO75191 536 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 OAZ2O95190 189 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 IL18RAPO95256 599 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 ITGB3P05106 788 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 SLFN14P0C7P3 912 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 LAMP2P13473 410 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 POLR2BP30876 1174 aaKnown RBP13.29□□□□□ -0.28
CTSA-210ENST00000606000 TAF6P49848 677 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 NDUFA8P51970 172 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 TDGQ13569 410 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 UVSSAQ2YD98 709 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 PABPC1LQ4VXU2 614 aaKnown RBP13.29□□□□□ -0.28
CTSA-210ENST00000606000 OVOS1Q6IE37 1185 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 STXBP4Q6ZWJ1 553 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 USP37Q86T82 979 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 C1orf127Q8N9H9 656 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 ZNF507Q8TCN5 953 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 BORCS6Q96GS4 357 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 RTP3Q9BQQ7 232 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 RPP25Q9BUL9 199 aaKnown RBP13.29□□□□□ -0.28
CTSA-210ENST00000606000 MTMR12Q9C0I1 747 aa13.29□□□□□ -0.28
CTSA-210ENST00000606000 AGPAT3Q9NRZ7 376 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms