RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 STK3Q13188 491 aa16.87■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 MRPL58Q14197 206 aaKnown RBP16.87■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 PPP2R5AQ15172 486 aa16.87■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 CALCRLQ16602 461 aa16.87■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 SH3PXD2AQ5TCZ1 1133 aa16.87■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 LRSAM1Q6UWE0 723 aa16.87■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 KCNB2Q92953 911 aa16.87■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 TMEM209Q96SK2 561 aa16.87■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 CCDC94Q9BW85 323 aaPredicted RBP16.87■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 CCDC113Q9H0I3 377 aa16.87■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 LHX6Q9UPM6 363 aa16.87■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 RHOBTB1O94844 696 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 MARCKSP29966 332 aaPredicted RBP16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 MCM4P33991 863 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 HSPA4P34932 840 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 TXKP42681 527 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 EFNA5P52803 228 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 EPHB3P54753 998 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 PLCB2Q00722 1185 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 CREB5Q02930 508 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 PLK5Q496M5 336 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 RNF19BQ6ZMZ0 732 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 CAMKK1Q8N5S9 505 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 OXER1Q8TDS5 423 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 ZCCHC14Q8WYQ9 949 aaKnown RBP16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 BSNDQ8WZ55 320 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 IFT74Q96LB3 600 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 THG1LQ9NWX6 298 aaKnown RBP16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 TPCN1Q9ULQ1 816 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 YIPF1Q9Y548 306 aa16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 PDCD11Q14690 1871 aaKnown RBP16.86■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 SPEGQ15772 3267 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 CDKL5O76039 1030 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 CAVIN2O95810 425 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 EDN1P05305 212 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 CEACAM1P13688 526 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 RPL9P32969 192 aaKnown RBP16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 ALDH1A3P47895 512 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 OSTNP61366 133 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 RING1Q06587 406 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 GRSF1Q12849 480 aaKnown RBP eCLIP16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 ITPRIPL2Q3MIP1 535 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 ARHGAP15Q53QZ3 475 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 STXBP5Q5T5C0 1151 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 ZNF274Q96GC6 653 aaPredicted RBP16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 SUSD3Q96L08 255 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 SCNM1Q9BWG6 230 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 ATXN3LQ9H3M9 355 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 OBP2AQ9NY56 170 aa16.85■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 GRM5P41594 1212 aa16.84■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 TNK2Q07912 1038 aa16.84■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 TOB2Q14106 344 aaPredicted RBP16.84■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 KARSQ15046 597 aaKnown RBP16.84■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 PKN3Q6P5Z2 889 aa16.84■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 RUFY3Q7L099 469 aa16.84■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 BPIFB1Q8TDL5 484 aa16.84■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 DDX12PQ92771 950 aa16.84■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 NACC1Q96RE7 527 aa16.84■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 TMEM121BQ9BXQ6 578 aaPredicted RBP16.84■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 BRMS1Q9HCU9 246 aa16.84■□□□□ 0.29
NEDD8-MDP1-204ENST00000605847 ARHGEF35A5YM69 484 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 FGF19O95750 216 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 ZNF568Q3ZCX4 644 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 EARS2Q5JPH6 523 aaKnown RBP16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 GPR158Q5T848 1215 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 NT5DC1Q5TFE4 455 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 PADI6Q6TGC4 694 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 TMC8Q8IU68 726 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CEP120Q8N960 986 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 GATA6Q92908 595 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 TBC1D32Q96NH3 1257 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 LRRC3BQ96PB8 259 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 PGLYRP2Q96PD5 576 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 LARP6Q9BRS8 491 aaKnown RBP16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 KIFC3Q9BVG8 833 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 DUSP15Q9H1R2 295 aaPredicted RBP16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 TUFT1Q9NNX1 390 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 TMEM9BQ9NQ34 198 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 WASF3Q9UPY6 502 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 TNFSF13BQ9Y275 285 aa16.83■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 LNP1A1A4G5 178 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 K7ERI5 159 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 NEMFO60524 1076 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 TOP3BO95985 862 aaKnown RBP16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CSRP1P21291 193 aaKnown RBP16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 GBP1P32455 592 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 KRT2P35908 639 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 YWHAHQ04917 246 aaPredicted RBP16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 DUSP4Q13115 394 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 XKR4Q5GH76 650 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 ALKAL1Q6UXT8 129 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CATSPER3Q86XQ3 398 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 ZMAT2Q96NC0 199 aaKnown RBP16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 ACAP3Q96P50 834 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 HHIPQ96QV1 700 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 LRRC3Q9BY71 257 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 OXCT2Q9BYC2 517 aaPredicted RBP16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 GJB4Q9NTQ9 266 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 ASB3Q9Y575 518 aa16.82■□□□□ 0.28
NEDD8-MDP1-204ENST00000605847 CNOT1A5YKK6 2376 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms