RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 CLEC16AQ2KHT3 1053 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 UBXN11Q5T124 520 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 TWF2Q6IBS0 349 aaKnown RBP20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 RNF180Q86T96 592 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 RSPH3Q86UC2 560 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 CTAGE6Q86UF2 777 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 SERINC5Q86VE9 423 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 CTAGE4Q8IX94 777 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 UBR7Q8N806 425 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 CAGE1Q8TC20 777 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 HPDLQ96IR7 371 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 CITO14578 2027 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 ATP8B3O60423 1300 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 PDE2AO00408 941 aaPredicted RBP20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 BUB1BO60566 1050 aaPredicted RBP20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 FKTNO75072 461 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 INHAP05111 366 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 UNGP13051 313 aaPredicted RBP20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 THPOP40225 353 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 ZNF677Q86XU0 584 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 CREG2Q8IUH2 290 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 PXYLP1Q8TE99 480 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 ZNF606Q8WXB4 792 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 C18orf25Q96B23 403 aaPredicted RBP20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 SMARCAL1Q9NZC9 954 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 EHD2Q9NZN4 543 aa20.51■□□□□ 0.87
TUBB4B-202ENST00000604929 NCANO14594 1321 aa20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 PRLRP16471 622 aa20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 ORC1Q13415 861 aa20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 ITGA7Q13683 1181 aa20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 NAA35Q5VZE5 725 aa20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 RSRC2Q7L4I2 434 aaKnown RBP20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 CD302Q8IX05 232 aa20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 TAF4BQ92750 862 aa20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 SNX27Q96L92 541 aa20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 OSBPL7Q9BZF2 842 aa20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 PLEKHA5Q9HAU0 1116 aa20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 TRMT13Q9NUP7 481 aaKnown RBP20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 ST3GAL5Q9UNP4 418 aa20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 TRPV2Q9Y5S1 764 aa20.5■□□□□ 0.87
TUBB4B-202ENST00000604929 RPS6KA5O75582 802 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 CST5P28325 142 aaPredicted RBP20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 ZNF132P52740 706 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 ACLYP53396 1101 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 RBP5P82980 135 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 PEX26Q7Z412 305 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 GOLGA1Q92805 767 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 ZNF653Q96CK0 615 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 MS4A14Q96JA4 679 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 SDCBP2Q9H190 292 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 SMYD3Q9H7B4 428 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 ITGA11Q9UKX5 1188 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 TCP1P17987 556 aaKnown RBP20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 BRD2P25440 801 aaKnown RBP20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 RPS6KA1Q15418 735 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 ALKAL1Q6UXT8 129 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 TUBGCP4Q9UGJ1 667 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 IPPQ9Y573 584 aa20.49■□□□□ 0.87
TUBB4B-202ENST00000604929 MYCP01106 439 aaPredicted RBP20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 GNRH1P01148 92 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 ATICP31939 592 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 RNASE9P60153 205 aaKnown RBP20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 SLFN11Q7Z7L1 901 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 NT5DC4Q86YG4 428 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 RHOT2Q8IXI1 618 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 SMG8Q8ND04 991 aaKnown RBP20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 ZSWIM1Q9BR11 485 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 NOD1Q9Y239 953 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 TMEM110-MUSTN1A8MSY1 372 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 PPEF2O14830 753 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 CYP1A1P04798 512 aaPredicted RBP20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 NSFP46459 744 aaKnown RBP20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 NOA1Q8NC60 698 aaKnown RBP20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 ARRDC4Q8NCT1 418 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 TFAP2BQ92481 460 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 ANKRD7Q92527 254 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 BTBD6Q96KE9 485 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 BCO2Q9BYV7 579 aa20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 SENP6Q9GZR1 1112 aaPredicted RBP20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 HMX1Q9NP08 348 aaPredicted RBP20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 CNOT8Q9UFF9 292 aaKnown RBP20.48■□□□□ 0.87
TUBB4B-202ENST00000604929 SMIM28A0A1B0GU29 152 aa20.47■□□□□ 0.87
TUBB4B-202ENST00000604929 KCNK3O14649 394 aa20.47■□□□□ 0.87
TUBB4B-202ENST00000604929 GRK4P32298 578 aa20.47■□□□□ 0.87
TUBB4B-202ENST00000604929 ZBTB6Q15916 424 aa20.47■□□□□ 0.87
TUBB4B-202ENST00000604929 LHX8Q68G74 356 aa20.47■□□□□ 0.87
TUBB4B-202ENST00000604929 LLGL2Q6P1M3 1020 aa20.47■□□□□ 0.87
TUBB4B-202ENST00000604929 NT5DC3Q86UY8 548 aa20.47■□□□□ 0.87
TUBB4B-202ENST00000604929 SESTD1Q86VW0 696 aa20.47■□□□□ 0.87
TUBB4B-202ENST00000604929 SYCE1Q8N0S2 351 aa20.47■□□□□ 0.87
TUBB4B-202ENST00000604929 NUP85Q9BW27 656 aa20.47■□□□□ 0.87
TUBB4B-202ENST00000604929 AGO3Q9H9G7 860 aaKnown RBP20.47■□□□□ 0.87
TUBB4B-202ENST00000604929 KIF4AO95239 1232 aa20.46■□□□□ 0.87
TUBB4B-202ENST00000604929 CD19P15391 556 aa20.46■□□□□ 0.87
TUBB4B-202ENST00000604929 ZSCAN20P17040 1043 aaPredicted RBP20.46■□□□□ 0.87
TUBB4B-202ENST00000604929 CCDC181Q5TID7 509 aa20.46■□□□□ 0.87
TUBB4B-202ENST00000604929 MCOLN2Q8IZK6 566 aa20.46■□□□□ 0.87
TUBB4B-202ENST00000604929 CNTN3Q9P232 1028 aa20.46■□□□□ 0.87
TUBB4B-202ENST00000604929 HMGXB4Q9UGU5 601 aa20.46■□□□□ 0.87
TUBB4B-202ENST00000604929 TRIM17Q9Y577 477 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms