RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 ZEB2O60315 1214 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 FGFR4P22455 802 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 CTNNA1P35221 906 aaKnown RBP16.06■□□□□ 0.16
CCDC12-211ENST00000604367 AARSP49588 968 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCDC12-211ENST00000604367 ZNF132P52740 706 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 MARCH8Q5T0T0 291 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 FAM71BQ8TC56 605 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 LENG1Q96BZ8 264 aaPredicted RBP16.06■□□□□ 0.16
CCDC12-211ENST00000604367 XYLT2Q9H1B5 865 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 PDZD7Q9H5P4 517 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 POLIQ9UNA4 740 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 PCDHA3Q9Y5H8 950 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 MYO1FO00160 1098 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 DAPK3O43293 454 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 GJB6O95452 261 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 MYBL1P10243 752 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 ASPAP45381 313 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 RAP1GAPP47736 663 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 TNFAIP2Q03169 654 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 TRIM72Q6ZMU5 477 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 ZNF771Q7L3S4 317 aaPredicted RBP16.06■□□□□ 0.16
CCDC12-211ENST00000604367 UBR7Q8N806 425 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 TRIM11Q96F44 468 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 TRIM51Q9BSJ1 452 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 DPH5Q9H2P9 285 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 AVENQ9NQS1 362 aaPredicted RBP16.06■□□□□ 0.16
CCDC12-211ENST00000604367 ADAM21Q9UKJ8 722 aa16.06■□□□□ 0.16
CCDC12-211ENST00000604367 ANK1P16157 1881 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 TCRBV7S2A1N4TA0A589 114 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 MEFVO15553 781 aaPredicted RBP16.05■□□□□ 0.16
CCDC12-211ENST00000604367 RNF40O75150 1001 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 ERLIN2O94905 339 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 IRX5P78411 483 aaPredicted RBP16.05■□□□□ 0.16
CCDC12-211ENST00000604367 POU5F1BQ06416 359 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 FAM187BQ17R55 369 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 WDR72Q3MJ13 1102 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 JADE1Q6IE81 842 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 ZDHHC14Q8IZN3 488 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 C18orf8Q96DM3 657 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 FAM49AQ9H0Q0 323 aaPredicted RBP16.05■□□□□ 0.16
CCDC12-211ENST00000604367 COL1A2P08123 1366 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 IGF2BP3O00425 579 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCDC12-211ENST00000604367 ITGB3P05106 788 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 ECHS1P30084 290 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 RWDD2BP57060 319 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 POU5F1Q01860 360 aaKnown RBP16.05■□□□□ 0.16
CCDC12-211ENST00000604367 KIZQ2M2Z5 673 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 LIN9Q5TKA1 542 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 IQSEC1Q6DN90 963 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 KIAA0319LQ8IZA0 1049 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 C1orf127Q8N9H9 656 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 NEUROG2Q9H2A3 272 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 NMRK2Q9NPI5 230 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 PRDM4Q9UKN5 801 aa16.05■□□□□ 0.16
CCDC12-211ENST00000604367 UTP11Q9Y3A2 253 aaKnown RBP16.05■□□□□ 0.16
CCDC12-211ENST00000604367 SLC15A5A6NIM6 579 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 IL18RAPO95256 599 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 MCF2P10911 925 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 CTNNA2P26232 953 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 ZNF157P51786 506 aaPredicted RBP16.04■□□□□ 0.16
CCDC12-211ENST00000604367 CDH8P55286 799 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 DR1Q01658 176 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 DMTNQ08495 405 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 MAMLD1Q13495 774 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
CCDC12-211ENST00000604367 C1orf131Q8NDD1 294 aaKnown RBP16.04■□□□□ 0.16
CCDC12-211ENST00000604367 FLRT1Q9NZU1 646 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 SIX4Q9UIU6 781 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 TSPAN1O60635 241 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 ORC1Q13415 861 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 CUL1Q13616 776 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 SLC10A6Q3KNW5 377 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 PHF13Q86YI8 300 aaPredicted RBP16.04■□□□□ 0.16
CCDC12-211ENST00000604367 PRELID2Q8N945 189 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 TFAP2BQ92481 460 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 MAGOHBQ96A72 148 aaKnown RBP16.04■□□□□ 0.16
CCDC12-211ENST00000604367 SLC5A4Q9NY91 659 aa16.04■□□□□ 0.16
CCDC12-211ENST00000604367 HSF2BPO75031 334 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 CYP2C19P33261 490 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 PTP4A2Q12974 167 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 NNTQ13423 1086 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 TAF1CQ15572 869 aaPredicted RBP16.03■□□□□ 0.16
CCDC12-211ENST00000604367 CLUL1Q15846 466 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 ZNF667Q5HYK9 610 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 SLC13A5Q86YT5 568 aaPredicted RBP16.03■□□□□ 0.16
CCDC12-211ENST00000604367 WHAMMQ8TF30 809 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 USTQ9Y2C2 406 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 TLR3O15455 904 aaKnown RBP16.03■□□□□ 0.16
CCDC12-211ENST00000604367 CD19P15391 556 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 LACTBP83111 547 aaPredicted RBP16.03■□□□□ 0.16
CCDC12-211ENST00000604367 CCL14Q16627 93 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 ZIM3Q96PE6 472 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 RUFY1Q96T51 708 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 FAM204AQ9H8W3 233 aa16.03■□□□□ 0.16
CCDC12-211ENST00000604367 MRPL47Q9HD33 250 aaKnown RBP16.03■□□□□ 0.16
CCDC12-211ENST00000604367 DNAH12Q6ZR08 3092 aa16.02■□□□□ 0.16
CCDC12-211ENST00000604367 O00370 1275 aa16.02■□□□□ 0.16
CCDC12-211ENST00000604367 PHF2O75151 1096 aa16.02■□□□□ 0.16
CCDC12-211ENST00000604367 HOXD8P13378 290 aaPredicted RBP16.02■□□□□ 0.16
CCDC12-211ENST00000604367 MMP8P22894 467 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms