RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 PARD3BQ8TEW8 1205 aa17.27■□□□□ 0.36
PPFIA3-213ENST00000602905 DACH1Q9UI36 760 aa17.27■□□□□ 0.36
PPFIA3-213ENST00000602905 DSEQ9UL01 958 aa17.27■□□□□ 0.36
PPFIA3-213ENST00000602905 CTNND2Q9UQB3 1225 aa17.27■□□□□ 0.36
PPFIA3-213ENST00000602905 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 KPNA7A9QM74 516 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 PPP1R3GB7ZBB8 358 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 PPEF2O14830 753 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 TEX28O15482 410 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 LINC01565O15544 149 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 CLSTN1O94985 981 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 FGFR1OPO95684 399 aaKnown RBP17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 GLUD1P00367 558 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 CD44P16070 742 aaKnown RBP17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 IGFBP6P24592 240 aaPredicted RBP17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 AARSP49588 968 aaKnown RBP eCLIP17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 YWHAHQ04917 246 aaPredicted RBP17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 BFSP1Q12934 665 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 BIRC3Q13489 604 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 COL19A1Q14993 1142 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 VARS2Q5ST30 1063 aaKnown RBP17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 ZNF280DQ6N043 979 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 TRAPPC11Q7Z392 1133 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 GLYCTKQ8IVS8 523 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 TMEM130Q8N3G9 435 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 MLKLQ8NB16 471 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 ATXN2LQ8WWM7 1075 aaKnown RBP17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 SENP8Q96LD8 212 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 POP1Q99575 1024 aaKnown RBP17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 OXCT2Q9BYC2 517 aaPredicted RBP17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 PRDM6Q9NQX0 595 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 DZANK1Q9NVP4 752 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 MTRRQ9UBK8 725 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 BACE2Q9Y5Z0 518 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 HCFC2Q9Y5Z7 792 aa17.26■□□□□ 0.35
PPFIA3-213ENST00000602905 PLXNA3P51805 1871 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 TRIM49BA6NDI0 452 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 CYB561D2O14569 222 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 IKBKBO14920 756 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 SLC16A3O15427 465 aaKnown RBP17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 STX10O60499 249 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 AKAP3O75969 853 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 C1RP00736 705 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 TYMPP19971 482 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 BMP6P22004 513 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 MRPS5P82675 430 aaKnown RBP17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 ENPEPQ07075 957 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 CTXN3Q4LDR2 81 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 FOXR2Q6PJQ5 311 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 TMEM184AQ6ZMB5 413 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 SYAP1Q96A49 352 aaPredicted RBP17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 CEP63Q96MT8 703 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 FAM50BQ9Y247 325 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 REV3LO60673 3130 aa17.25■□□□□ 0.35
PPFIA3-213ENST00000602905 PTPRJQ12913 1337 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 LRRIQ3A6PVS8 624 aaPredicted RBP17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 HUS1O60921 280 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 HOXB8P17481 243 aaPredicted RBP17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 RPL17P18621 184 aaKnown RBP17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 CLCN4P51793 760 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 PMS1P54277 932 aaKnown RBP17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 PUS10Q3MIT2 529 aaKnown RBP17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 OVOS1Q6IE37 1185 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 PALB2Q86YC2 1186 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 THEM5Q8N1Q8 247 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 SLC22A17Q8WUG5 538 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 HPDLQ96IR7 371 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 CLSTN3Q9BQT9 956 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 SIX4Q9UIU6 781 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 CD207Q9UJ71 328 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 BARX2Q9UMQ3 279 aaPredicted RBP17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 CDY1Q9Y6F8 540 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 EYSQ5T1H1 3165 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 PRUNE2Q8WUY3 3088 aa17.24■□□□□ 0.35
PPFIA3-213ENST00000602905 H3BQ06 376 aaPredicted RBP17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 SPTLC1O15269 473 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 TBX10O75333 385 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 GLP2RO95838 553 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 EPCAMP16422 314 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 OR1D2P34982 312 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 STX17P56962 302 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 NLRP12P59046 1061 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 CLDN10P78369 228 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 LEXMQ3ZCV2 418 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 CCDC40Q4G0X9 1142 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 ANKRD54Q6NXT1 300 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 ZC3H3Q8IXZ2 948 aaKnown RBP17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 HDAC7Q8WUI4 952 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 ZNF516Q92618 1163 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 EEF2KMTQ96G04 330 aa17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 METTL14Q9HCE5 456 aaKnown RBP17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 ARMCX3Q9UH62 379 aaPredicted RBP17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 TIMM13Q9Y5L4 95 aaPredicted RBP17.23■□□□□ 0.35
PPFIA3-213ENST00000602905 OR6C75A6NL08 312 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 OAZ2O95190 189 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 GNA14O95837 355 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 CYP11A1P05108 521 aa17.22■□□□□ 0.35
PPFIA3-213ENST00000602905 ATICP31939 592 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms