RNA–Protein interactions for RNA: ENST00000602670.1

SFXN2-209, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-209ENST00000602670 PLK5Q496M5 336 aa13.94□□□□□ -0.18
SFXN2-209ENST00000602670 EARS2Q5JPH6 523 aaKnown RBP13.94□□□□□ -0.18
SFXN2-209ENST00000602670 STXBP5Q5T5C0 1151 aa13.94□□□□□ -0.18
SFXN2-209ENST00000602670 SH3PXD2AQ5TCZ1 1133 aa13.94□□□□□ -0.18
SFXN2-209ENST00000602670 PIK3AP1Q6ZUJ8 805 aa13.94□□□□□ -0.18
SFXN2-209ENST00000602670 TMC8Q8IU68 726 aa13.94□□□□□ -0.18
SFXN2-209ENST00000602670 GPIHBP1Q8IV16 184 aa13.94□□□□□ -0.18
SFXN2-209ENST00000602670 NUP210Q8TEM1 1887 aaPredicted RBP13.94□□□□□ -0.18
SFXN2-209ENST00000602670 ZCCHC14Q8WYQ9 949 aaKnown RBP13.94□□□□□ -0.18
SFXN2-209ENST00000602670 NAP1L4Q99733 375 aaKnown RBP13.94□□□□□ -0.18
SFXN2-209ENST00000602670 MKNK1Q9BUB5 465 aa13.94□□□□□ -0.18
SFXN2-209ENST00000602670 SNX14Q9Y5W7 946 aa13.94□□□□□ -0.18
SFXN2-209ENST00000602670 PODXLO00592 558 aa13.93□□□□□ -0.18
SFXN2-209ENST00000602670 BAG4O95429 457 aaKnown RBP13.93□□□□□ -0.18
SFXN2-209ENST00000602670 LIG1P18858 919 aa13.93□□□□□ -0.18
SFXN2-209ENST00000602670 TNK2Q07912 1038 aa13.93□□□□□ -0.18
SFXN2-209ENST00000602670 CTXN3Q4LDR2 81 aa13.93□□□□□ -0.18
SFXN2-209ENST00000602670 ARHGAP29Q52LW3 1261 aa13.93□□□□□ -0.18
SFXN2-209ENST00000602670 RNF19BQ6ZMZ0 732 aa13.93□□□□□ -0.18
SFXN2-209ENST00000602670 ARID3BQ8IVW6 561 aaPredicted RBP13.93□□□□□ -0.18
SFXN2-209ENST00000602670 MCPH1Q8NEM0 835 aa13.93□□□□□ -0.18
SFXN2-209ENST00000602670 OXER1Q8TDS5 423 aa13.93□□□□□ -0.18
SFXN2-209ENST00000602670 SCNM1Q9BWG6 230 aa13.93□□□□□ -0.18
SFXN2-209ENST00000602670 DUSP15Q9H1R2 295 aaPredicted RBP13.93□□□□□ -0.18
SFXN2-209ENST00000602670 YIPF1Q9Y548 306 aa13.93□□□□□ -0.18
SFXN2-209ENST00000602670 GCN1Q92616 2671 aaKnown RBP13.93□□□□□ -0.18
SFXN2-209ENST00000602670 ATG2BQ96BY7 2078 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 LNP1A1A4G5 178 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 FAM205CA6NFA0 338 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 VNN2O95498 520 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 XRCC6P12956 609 aaKnown RBP eCLIP13.92□□□□□ -0.18
SFXN2-209ENST00000602670 XKR4Q5GH76 650 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 BMP2KLQ5H9B9 411 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 ZNF280DQ6N043 979 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 ALKAL1Q6UXT8 129 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 CEP120Q8N960 986 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 ZMAT2Q96NC0 199 aaKnown RBP13.92□□□□□ -0.18
SFXN2-209ENST00000602670 KIFC3Q9BVG8 833 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 DNAJC25Q9H1X3 360 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 POLR3BQ9NW08 1133 aaPredicted RBP13.92□□□□□ -0.18
SFXN2-209ENST00000602670 MAFFQ9ULX9 164 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 SLC8A2Q9UPR5 921 aa13.92□□□□□ -0.18
SFXN2-209ENST00000602670 CPLX1O14810 134 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 PRAMEF12O95522 483 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 ATP2B1P20020 1258 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 HSPA4P34932 840 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 NAMPTP43490 491 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 CACNB1Q02641 598 aaPredicted RBP13.91□□□□□ -0.18
SFXN2-209ENST00000602670 CREB5Q02930 508 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 TOB2Q14106 344 aaPredicted RBP13.91□□□□□ -0.18
SFXN2-209ENST00000602670 NT5DC1Q5TFE4 455 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 DAB2IPQ5VWQ8 1189 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 HAUS6Q7Z4H7 955 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 BEST2Q8NFU1 509 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 DEPTORQ8TB45 409 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 SUSD3Q96L08 255 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 GJB4Q9NTQ9 266 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 PCDHA12Q9UN75 941 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 NUB1Q9Y5A7 615 aa13.91□□□□□ -0.18
SFXN2-209ENST00000602670 NUP205Q92621 2012 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 BCLAF3A2AJT9 711 aaKnown RBP13.9□□□□□ -0.18
SFXN2-209ENST00000602670 TAF4O00268 1085 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 CAVIN2O95810 425 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 SPATA31C1P0DKV0 1188 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 CEACAM1P13688 526 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 CPB1P15086 417 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 CSRP1P21291 193 aaKnown RBP13.9□□□□□ -0.18
SFXN2-209ENST00000602670 GRM5P41594 1212 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 ELF2Q15723 593 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 TMEM196Q5HYL7 178 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 ATF7IP2Q5U623 682 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 FSTL4Q6MZW2 842 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 GAREM2Q75VX8 874 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 DDX12PQ92771 950 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 HHIPQ96QV1 700 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 TMEM209Q96SK2 561 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 CRISPLD1Q9H336 500 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 TTC12Q9H892 705 aaPredicted RBP13.9□□□□□ -0.18
SFXN2-209ENST00000602670 SLC38A7Q9NVC3 462 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 OBP2AQ9NY56 170 aa13.9□□□□□ -0.18
SFXN2-209ENST00000602670 CACNA1EQ15878 2313 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 ASCC3Q8N3C0 2202 aaKnown RBP13.89□□□□□ -0.19
SFXN2-209ENST00000602670 DPYSL4O14531 572 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 DCLK1O15075 740 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 ATG13O75143 517 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 MCM4P33991 863 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 YARSP54577 528 aaKnown RBP13.89□□□□□ -0.19
SFXN2-209ENST00000602670 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 CALCRLQ16602 461 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 ITPRIPL2Q3MIP1 535 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 CAMKK1Q8N5S9 505 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 APPL2Q8NEU8 664 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 BPIFB1Q8TDL5 484 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 COL26A1Q96A83 441 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 C18orf25Q96B23 403 aaPredicted RBP13.89□□□□□ -0.19
SFXN2-209ENST00000602670 CHFRQ96EP1 664 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 PGLYRP2Q96PD5 576 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 CDT1Q9H211 546 aa13.89□□□□□ -0.19
SFXN2-209ENST00000602670 TOPORSQ9NS56 1045 aaPredicted RBP13.89□□□□□ -0.19
SFXN2-209ENST00000602670 DAXXQ9UER7 740 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms