RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 UBQLN1Q9UMX0 589 aaKnown RBP19.59■□□□□ 0.73
CHMP2A-208ENST00000601220 NCANO14594 1321 aa19.58■□□□□ 0.73
CHMP2A-208ENST00000601220 PPEF2O14830 753 aa19.58■□□□□ 0.72
CHMP2A-208ENST00000601220 MARCKSP29966 332 aaPredicted RBP19.58■□□□□ 0.72
CHMP2A-208ENST00000601220 RPS9P46781 194 aaKnown RBP19.58■□□□□ 0.72
CHMP2A-208ENST00000601220 YWHAHQ04917 246 aaPredicted RBP19.58■□□□□ 0.72
CHMP2A-208ENST00000601220 GRM2Q14416 872 aa19.58■□□□□ 0.72
CHMP2A-208ENST00000601220 CYP4A22Q5TCH4 519 aa19.58■□□□□ 0.72
CHMP2A-208ENST00000601220 VITQ6UXI7 678 aa19.58■□□□□ 0.72
CHMP2A-208ENST00000601220 ZNF852Q6ZMS4 543 aa19.58■□□□□ 0.72
CHMP2A-208ENST00000601220 GPBP1Q86WP2 473 aa19.58■□□□□ 0.72
CHMP2A-208ENST00000601220 SMARCD2Q92925 531 aa19.58■□□□□ 0.72
CHMP2A-208ENST00000601220 TRPV5Q9NQA5 729 aa19.58■□□□□ 0.72
CHMP2A-208ENST00000601220 DNAH14Q0VDD8 3507 aa19.58■□□□□ 0.72
CHMP2A-208ENST00000601220 A0A0B4J269 797 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 H3BQV1 296 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 LAMTOR5O43504 91 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 OR4Q2P0C623 313 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 GJA1P17302 382 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 KYAT1Q16773 422 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 IQCEQ6IPM2 695 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 ERMP1Q7Z2K6 904 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 LEMD2Q8NC56 503 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 SHKBP1Q8TBC3 707 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 BICD1Q96G01 975 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 TSPAN18Q96SJ8 248 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 TRMT61BQ9BVS5 477 aaKnown RBP19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 OXCT2Q9BYC2 517 aaPredicted RBP19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 DNAJC25Q9H1X3 360 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 CPSF3Q9UKF6 684 aaKnown RBP19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 YIPF1Q9Y548 306 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 OTOGLQ3ZCN5 2332 aa19.57■□□□□ 0.72
CHMP2A-208ENST00000601220 GPR179Q6PRD1 2367 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 SPTLC1O15269 473 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 OGTO15294 1046 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 CPB1P15086 417 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 TYMPP19971 482 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 SCP2P22307 547 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 VIPR2P41587 438 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 MATR3P43243 847 aaKnown RBP eCLIP19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 LIG4P49917 911 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 LILRA4P59901 499 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 CSTF1Q05048 431 aaKnown RBP19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 PPP2R3AQ06190 1150 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 GPR17Q13304 367 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 MCM6Q14566 821 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 SPATA1Q5VX52 437 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 TMC8Q8IU68 726 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 ELMOD1Q8N336 334 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 DCLK2Q8N568 766 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 MYCT1Q8N699 235 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 ZBTB44Q8NCP5 570 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 RAD54LQ92698 747 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 BORCS6Q96GS4 357 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 PARVGQ9HBI0 331 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 ZNF334Q9HCZ1 680 aaPredicted RBP19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 CITO14578 2027 aa19.56■□□□□ 0.72
CHMP2A-208ENST00000601220 OR6C75A6NL08 312 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 ARNTLO00327 626 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 HNRNPDLO14979 420 aaKnown RBP19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 TRAK2O60296 914 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 LILRB5O75023 590 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 MYL4P12829 197 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 PSMC3P17980 439 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 PLCG1P19174 1290 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 UBA7P41226 1012 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 GTF2BQ00403 316 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 DUSP4Q13115 394 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 DHX8Q14562 1220 aaKnown RBP19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 TEAD2Q15562 447 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 CENPPQ6IPU0 288 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 MAMSTRQ6ZN01 415 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 FANCMQ8IYD8 2048 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 ZSCAN18Q8TBC5 510 aaPredicted RBP19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 RUBCNQ92622 972 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 RMDN1Q96DB5 314 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 RSPRY1Q96DX4 576 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 CALML4Q96GE6 196 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 PGLYRP2Q96PD5 576 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 BRD9Q9H8M2 597 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 RPF1Q9H9Y2 349 aaKnown RBP19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 PRMT8Q9NR22 394 aaPredicted RBP19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 ASAH2Q9NR71 780 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 PCDHGA2Q9Y5H1 932 aa19.55■□□□□ 0.72
CHMP2A-208ENST00000601220 PDCD11Q14690 1871 aaKnown RBP19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 ANKRD63C9JTQ0 380 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 K7ENM7 598 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 PIRO00625 290 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 NCAM2O15394 837 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 FAM13AO94988 1023 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 LONP1P36776 959 aaKnown RBP19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 MTAPQ13126 283 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 MYBPC2Q14324 1141 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 KARSQ15046 597 aaKnown RBP19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 LARP1BQ659C4 914 aaKnown RBP19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 JADE1Q6IE81 842 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 DSTYKQ6XUX3 929 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 MFSD6LQ8IWD5 586 aa19.54■□□□□ 0.72
CHMP2A-208ENST00000601220 CD302Q8IX05 232 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms