RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 ODC1P11926 461 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 PNPLA4P41247 253 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 MTHFRP42898 656 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 TAF6P49848 677 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 CYP24A1Q07973 514 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 MYBPC2Q14324 1141 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 CBX2Q14781 532 aaPredicted RBP18.2■□□□□ 0.5
TRIM28-215ENST00000601150 PSMD6Q15008 389 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 SV2CQ496J9 727 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 CTXN3Q4LDR2 81 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 SLC8B1Q6J4K2 584 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 ZNF280DQ6N043 979 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 TMC5Q6UXY8 1006 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 C1orf127Q8N9H9 656 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 CMASQ8NFW8 434 aaPredicted RBP18.2■□□□□ 0.5
TRIM28-215ENST00000601150 SPATA20Q8TB22 786 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 TMEM174Q8WUU8 243 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 ANKRD36BP1Q96IX9 119 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 RIPOR3Q96MK2 946 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 ZNF560Q96MR9 790 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 NECTIN4Q96NY8 510 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 IPO9Q96P70 1041 aaKnown RBP18.2■□□□□ 0.5
TRIM28-215ENST00000601150 INTS13Q9NVM9 706 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 DMAC2Q9NW81 257 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 FBXW11Q9UKB1 542 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 MAPK8IP1Q9UQF2 711 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 PCDHA5Q9Y5H7 936 aa18.2■□□□□ 0.5
TRIM28-215ENST00000601150 SPTLC1O15269 473 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 TBC1D4O60343 1298 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 TNNC2P02585 160 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 NR3C1P04150 777 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 TYMPP19971 482 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 POLR2BP30876 1174 aaKnown RBP18.19■□□□□ 0.5
TRIM28-215ENST00000601150 YWHAHQ04917 246 aaPredicted RBP18.19■□□□□ 0.5
TRIM28-215ENST00000601150 ZP2Q05996 745 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 DUOXA2Q1HG44 320 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 ATAT1Q5SQI0 421 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 GPR149Q86SP6 731 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 USP37Q86T82 979 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 WDR49Q8IV35 697 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 SENP8Q96LD8 212 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 MFSD14AQ96MC6 490 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 FNBP1Q96RU3 617 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 PHF7Q9BWX1 381 aaPredicted RBP18.19■□□□□ 0.5
TRIM28-215ENST00000601150 GTPBP4Q9BZE4 634 aaKnown RBP18.19■□□□□ 0.5
TRIM28-215ENST00000601150 MTMR12Q9C0I1 747 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 SPTBN5Q9NRC6 3674 aaKnown RBP18.19■□□□□ 0.5
TRIM28-215ENST00000601150 FBXL5Q9UKA1 691 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 AGAP1Q9UPQ3 857 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 TRAF3IP3Q9Y228 551 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 PTPRJQ12913 1337 aa18.19■□□□□ 0.5
TRIM28-215ENST00000601150 NCOR1O75376 2440 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 CCDC195A0A1B0GUA6 201 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 PRPF40AO75400 957 aaKnown RBP18.18■□□□□ 0.5
TRIM28-215ENST00000601150 OAZ2O95190 189 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 WEE2P0C1S8 567 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 RBP5P82980 135 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 LIN9Q5TKA1 542 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 ZNF658Q5TYW1 1059 aaPredicted RBP18.18■□□□□ 0.5
TRIM28-215ENST00000601150 LMBRD2Q68DH5 695 aaPredicted RBP18.18■□□□□ 0.5
TRIM28-215ENST00000601150 CYP26C1Q6V0L0 522 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 C15orf39Q6ZRI6 1047 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 CSGALNACT2Q8N6G5 542 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 LRRC52Q8N7C0 313 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 OR5B17Q8NGF7 314 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 ERCC4Q92889 916 aaPredicted RBP18.18■□□□□ 0.5
TRIM28-215ENST00000601150 CCDC127Q96BQ5 260 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 FAM84AQ96KN4 292 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 CGRRF1Q99675 332 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 OXCT2Q9BYC2 517 aaPredicted RBP18.18■□□□□ 0.5
TRIM28-215ENST00000601150 ZDHHC7Q9NXF8 308 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 CDH22Q9UJ99 828 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 DSEQ9UL01 958 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 R3HCC1Q9Y3T6 440 aaKnown RBP18.18■□□□□ 0.5
TRIM28-215ENST00000601150 TIMM13Q9Y5L4 95 aaPredicted RBP18.18■□□□□ 0.5
TRIM28-215ENST00000601150 TTC28Q96AY4 2481 aa18.18■□□□□ 0.5
TRIM28-215ENST00000601150 C19orf67A6NJJ6 358 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 KPNA7A9QM74 516 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 TNFRSF10AO00220 468 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 CYB561D2O14569 222 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 RFPL2O75678 378 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 ZMYND10O75800 440 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 PAPLNO95428 1278 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 CYP11A1P05108 521 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 KRT19P08727 400 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 DLATP10515 647 aaKnown RBP18.17■□□□□ 0.5
TRIM28-215ENST00000601150 TNNI1P19237 187 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 SSTR3P32745 418 aaPredicted RBP18.17■□□□□ 0.5
TRIM28-215ENST00000601150 ARPP19P56211 112 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 ROR1Q01973 937 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 NFIL3Q16649 462 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 OVOS1Q6IE37 1185 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 CLEC17AQ6ZS10 378 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 SMYD4Q8IYR2 804 aaPredicted RBP18.17■□□□□ 0.5
TRIM28-215ENST00000601150 GJD3Q8N144 294 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 ZNF461Q8TAF7 563 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 CXorf38Q8TB03 319 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 BORCS6Q96GS4 357 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 RHOBTB2Q9BYZ6 727 aa18.17■□□□□ 0.5
TRIM28-215ENST00000601150 POMKQ9H5K3 350 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms