RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 KRT31Q15323 416 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 ZACNQ401N2 412 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 SMYD5Q6GMV2 418 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 JADE1Q6IE81 842 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 LRRC43Q8N309 656 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 KLHL23Q8NBE8 558 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 RNF169Q8NCN4 708 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 SMRP1Q8NCR6 262 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 BEST2Q8NFU1 509 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 VN1R2Q8NFZ6 395 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 HELQQ8TDG4 1101 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 EDAQ92838 391 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 CCDC127Q96BQ5 260 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 ANKRD36BP1Q96IX9 119 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 ZFP42Q96MM3 310 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 UROC1Q96N76 676 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 TUBGCP2Q9BSJ2 902 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 TMEM8AQ9HCN3 771 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 TBC1D13Q9NVG8 400 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 MIOSQ9NXC5 875 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 KLK14Q9P0G3 267 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 HCSTQ9UBK5 93 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 ITGA11Q9UKX5 1188 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 RWDD3Q9Y3V2 267 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 C2orf16Q68DN1 1984 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 STAU1O95793 577 aaKnown RBP12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 TNNC2P02585 160 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 NFICP08651 508 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 DLATP10515 647 aaKnown RBP12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 TNNI1P19237 187 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 RPL9P32969 192 aaKnown RBP12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 MTIF2P46199 727 aaKnown RBP12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 SCNN1GP51170 649 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 AFF1P51825 1210 aaKnown RBP12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 DLG4P78352 724 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 PPP3CAQ08209 521 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 KCNH2Q12809 1159 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 CBX2Q14781 532 aaPredicted RBP12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 PAN2Q504Q3 1202 aaKnown RBP12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 MIIPQ5JXC2 388 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 KRT39Q6A163 491 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 SV2AQ7L0J3 742 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 BMP8AQ7Z5Y6 402 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 EFHBQ8N7U6 833 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 CXorf38Q8TB03 319 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 ZNF516Q92618 1163 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 DDX27Q96GQ7 796 aaKnown RBP12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 TMEM175Q9BSA9 504 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 PLVAPQ9BX97 442 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 RBSNQ9H1K0 784 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 BARX2Q9UMQ3 279 aaPredicted RBP12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 DNAH14Q0VDD8 3507 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 PTPRJQ12913 1337 aa12.56□□□□□ -0.4
CHMP2A-207ENST00000600804 RIF1Q5UIP0 2472 aaKnown RBP12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 ANO9A1A5B4 782 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 TBKBP1A7MCY6 615 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 TMEM189-UBE2V1I3L0A0 370 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 AFPP02771 609 aaKnown RBP12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 TPM2P07951 284 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 TMEM191BP0C7N4 346 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 TRIM49P0CI25 452 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 TRIM49CP0CI26 452 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 ATP1A3P13637 1013 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 NRIP1P48552 1158 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 FMO5P49326 533 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 NDUFV1P49821 464 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 MXI1P50539 228 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 COPB1P53618 953 aaKnown RBP12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 TUSC3Q13454 348 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 VWA3BQ502W6 1294 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 SARM1Q6SZW1 724 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 TRIM67Q6ZTA4 783 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 TRAPPC11Q7Z392 1133 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 COLGALT2Q8IYK4 626 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 C1orf127Q8N9H9 656 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 RNF214Q8ND24 703 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 OR5B17Q8NGF7 314 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 POF1BQ8WVV4 589 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 FAXDC2Q96IV6 333 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 POP1Q99575 1024 aaKnown RBP12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 MTMR12Q9C0I1 747 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 CXCL16Q9H2A7 254 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 NDST4Q9H3R1 872 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 VRTNQ9H8Y1 702 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 DPP3Q9NY33 737 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 INPP5FQ9Y2H2 1132 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 ZNF292O60281 2723 aa12.55□□□□□ -0.4
CHMP2A-207ENST00000600804 A0A1B0GTH6 734 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 TMEM221A6NGB7 291 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 LGALS16A8MUM7 142 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 M0R296 226 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 PIRO00625 290 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 ATICP31939 592 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 GCLMP48507 274 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 VCPP55072 806 aaKnown RBP12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 RBP5P82980 135 aa12.54□□□□□ -0.4
CHMP2A-207ENST00000600804 ZXDAP98168 799 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms