RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CD4P01730 458 aa18.89■□□□□ 0.61
SHKBP1-224ENST00000600718 MMEP08473 750 aa18.89■□□□□ 0.61
SHKBP1-224ENST00000600718 TRIM58Q8NG06 486 aa18.89■□□□□ 0.61
SHKBP1-224ENST00000600718 ISCUQ9H1K1 167 aa18.89■□□□□ 0.61
SHKBP1-224ENST00000600718 CYP3A43Q9HB55 503 aa18.89■□□□□ 0.61
SHKBP1-224ENST00000600718 KLK14Q9P0G3 267 aa18.89■□□□□ 0.61
SHKBP1-224ENST00000600718 RTN2O75298 545 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 MYCP01106 439 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 ZNF132P52740 706 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 GALCP54803 685 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 MYO1EQ12965 1108 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 DSC3Q14574 896 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 MRPL10Q7Z7H8 261 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 DNAJC5GQ8N7S2 189 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 NOX5Q96PH1 765 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 PCDHB18PQ96TA0 734 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 OSBPL7Q9BZF2 842 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 FAM124BQ9H5Z6 455 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 POLIQ9UNA4 740 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 RALGAPA2Q2PPJ7 1873 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 A0A0A6YYK5 440 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 TMCO5BA8MYB1 307 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 WEE2P0C1S8 567 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 TMEM253P0C7T8 217 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 ITGA4P13612 1032 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 CYP3A5P20815 502 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 RAB27AP51159 221 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 LRRC52Q8N7C0 313 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 CAGE1Q8TC20 777 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 NAPGQ99747 312 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 SALL4Q9UJQ4 1053 aa18.88■□□□□ 0.61
SHKBP1-224ENST00000600718 CITO14578 2027 aa18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 ANKRD62A6NC57 917 aa18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 TLR3O15455 904 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 ZNF623O75123 536 aa18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 URI1O94763 535 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 MOCS3O95396 460 aa18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 FTLP02792 175 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 CD58P19256 250 aa18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 GNA15P30679 374 aa18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 TRAF7Q6Q0C0 670 aa18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 PALB2Q86YC2 1186 aa18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 TMEM130Q8N3G9 435 aa18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 C18orf25Q96B23 403 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 ALS2CR12Q96Q35 445 aa18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 TAS2R14Q9NYV8 317 aa18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 TUBGCP4Q9UGJ1 667 aa18.87■□□□□ 0.61
SHKBP1-224ENST00000600718 SKIP12755 728 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 NAP1L1P55209 391 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 IFI16Q16666 785 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 GLRA4Q5JXX5 417 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 SCARA5Q6ZMJ2 495 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 TTC39CQ8N584 583 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 CTNNBL1Q8WYA6 563 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 GIT1Q9Y2X7 761 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 ANO9A1A5B4 782 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 TNNC1P63316 161 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 TUBB2AQ13885 445 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 C9orf57Q5W0N0 161 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 TRIM72Q6ZMU5 477 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 CTU1Q7Z7A3 348 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 DNAAF5Q86Y56 855 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 FAM126BQ8IXS8 530 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 TUBB2BQ9BVA1 445 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 L2HGDHQ9H9P8 463 aa18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-224ENST00000600718 RIOK3O14730 519 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-224ENST00000600718 BUB1O43683 1085 aa18.85■□□□□ 0.61
SHKBP1-224ENST00000600718 ATF7P17544 494 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-224ENST00000600718 BFSP2Q13515 415 aa18.85■□□□□ 0.61
SHKBP1-224ENST00000600718 CLEC16AQ2KHT3 1053 aa18.85■□□□□ 0.61
SHKBP1-224ENST00000600718 ACAD10Q6JQN1 1059 aa18.85■□□□□ 0.61
SHKBP1-224ENST00000600718 ADAM2Q99965 735 aa18.85■□□□□ 0.61
SHKBP1-224ENST00000600718 CAPN6Q9Y6Q1 641 aa18.85■□□□□ 0.61
SHKBP1-224ENST00000600718 A0A0U1RQF3 1178 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 PIRO00625 290 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 THAP12O43422 761 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 MGEA5O60502 916 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 CALCAP01258 141 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 CDH8P55286 799 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 ZNF606Q8WXB4 792 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 CRISPLD2Q9H0B8 497 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 SDCBP2Q9H190 292 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 SMYD3Q9H7B4 428 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 SLC38A7Q9NVC3 462 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 JRKLQ9Y4A0 524 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 SELPP16109 830 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 PNPLA4P41247 253 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 NOP2P46087 812 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 GPC5P78333 572 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 FBXO46Q6PJ61 603 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 PGBD4Q96DM1 585 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 PPP1R10Q96QC0 940 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 UBN1Q9NPG3 1134 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 RNF19AQ9NV58 838 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 PUF60Q9UHX1 559 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 NCANO14594 1321 aa18.84■□□□□ 0.61
SHKBP1-224ENST00000600718 PTGESO14684 152 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 CYP1A1P04798 512 aaPredicted RBP18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 PAEPP09466 180 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms