RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 SMG5Q9UPR3 1016 aaKnown RBP23.08■■□□□ 1.29
PNKP-212ENST00000599454 NCOR2Q9Y618 2525 aa23.08■■□□□ 1.28
PNKP-212ENST00000599454 SFI1A8K8P3 1242 aa23.07■■□□□ 1.28
PNKP-212ENST00000599454 M0QZQ0 153 aa23.07■■□□□ 1.28
PNKP-212ENST00000599454 LRPAP1P30533 357 aa23.07■■□□□ 1.28
PNKP-212ENST00000599454 NRLP54845 237 aa23.07■■□□□ 1.28
PNKP-212ENST00000599454 YWHAHQ04917 246 aaPredicted RBP23.07■■□□□ 1.28
PNKP-212ENST00000599454 MTAPQ13126 283 aa23.07■■□□□ 1.28
PNKP-212ENST00000599454 PLD1Q13393 1074 aa23.07■■□□□ 1.28
PNKP-212ENST00000599454 VITQ6UXI7 678 aa23.07■■□□□ 1.28
PNKP-212ENST00000599454 HS6ST3Q8IZP7 471 aa23.07■■□□□ 1.28
PNKP-212ENST00000599454 ZNF687Q8N1G0 1237 aa23.07■■□□□ 1.28
PNKP-212ENST00000599454 SYT2Q8N9I0 419 aaPredicted RBP23.07■■□□□ 1.28
PNKP-212ENST00000599454 BEST2Q8NFU1 509 aa23.07■■□□□ 1.28
PNKP-212ENST00000599454 TUBGCP4Q9UGJ1 667 aa23.07■■□□□ 1.28
PNKP-212ENST00000599454 NDRG2Q9UN36 371 aaKnown RBP23.07■■□□□ 1.28
PNKP-212ENST00000599454 KIF3AQ9Y496 699 aa23.07■■□□□ 1.28
PNKP-212ENST00000599454 MED19A0JLT2 244 aaPredicted RBP23.06■■□□□ 1.28
PNKP-212ENST00000599454 MOSPD3O75425 235 aa23.06■■□□□ 1.28
PNKP-212ENST00000599454 OAZ2O95190 189 aa23.06■■□□□ 1.28
PNKP-212ENST00000599454 CLTAP09496 248 aa23.06■■□□□ 1.28
PNKP-212ENST00000599454 MYL4P12829 197 aa23.06■■□□□ 1.28
PNKP-212ENST00000599454 CYP3A5P20815 502 aa23.06■■□□□ 1.28
PNKP-212ENST00000599454 GDI1P31150 447 aa23.06■■□□□ 1.28
PNKP-212ENST00000599454 MLLT6P55198 1093 aaPredicted RBP23.06■■□□□ 1.28
PNKP-212ENST00000599454 KYAT1Q16773 422 aa23.06■■□□□ 1.28
PNKP-212ENST00000599454 RILPL1Q5EBL4 403 aa23.06■■□□□ 1.28
PNKP-212ENST00000599454 KCNN1Q92952 543 aa23.06■■□□□ 1.28
PNKP-212ENST00000599454 SPTBN2O15020 2390 aa23.06■■□□□ 1.28
PNKP-212ENST00000599454 XPOTO43592 962 aaKnown RBP23.05■■□□□ 1.28
PNKP-212ENST00000599454 CXCL8P10145 99 aa23.05■■□□□ 1.28
PNKP-212ENST00000599454 SCP2P22307 547 aa23.05■■□□□ 1.28
PNKP-212ENST00000599454 ZRSR1Q15695 479 aaKnown RBP23.05■■□□□ 1.28
PNKP-212ENST00000599454 RSPO4Q2I0M5 234 aaPredicted RBP23.05■■□□□ 1.28
PNKP-212ENST00000599454 SEZ6Q53EL9 994 aa23.05■■□□□ 1.28
PNKP-212ENST00000599454 C1orf228Q6PIY5 440 aa23.05■■□□□ 1.28
PNKP-212ENST00000599454 RNF19BQ6ZMZ0 732 aa23.05■■□□□ 1.28
PNKP-212ENST00000599454 MFSD6LQ8IWD5 586 aa23.05■■□□□ 1.28
PNKP-212ENST00000599454 ZSCAN18Q8TBC5 510 aaPredicted RBP23.05■■□□□ 1.28
PNKP-212ENST00000599454 FAM3CQ92520 227 aa23.05■■□□□ 1.28
PNKP-212ENST00000599454 MSANTD3Q96H12 275 aa23.05■■□□□ 1.28
PNKP-212ENST00000599454 ZSWIM3Q96MP5 696 aa23.05■■□□□ 1.28
PNKP-212ENST00000599454 TSPAN18Q96SJ8 248 aa23.05■■□□□ 1.28
PNKP-212ENST00000599454 LARSQ9P2J5 1176 aaKnown RBP23.05■■□□□ 1.28
PNKP-212ENST00000599454 UBQLN1Q9UMX0 589 aaKnown RBP23.05■■□□□ 1.28
PNKP-212ENST00000599454 YIPF1Q9Y548 306 aa23.05■■□□□ 1.28
PNKP-212ENST00000599454 PIAS3Q9Y6X2 628 aa23.05■■□□□ 1.28
PNKP-212ENST00000599454 TCHHQ07283 1943 aa23.04■■□□□ 1.28
PNKP-212ENST00000599454 TTC26A0AVF1 554 aa23.04■■□□□ 1.28
PNKP-212ENST00000599454 OR6C75A6NL08 312 aa23.04■■□□□ 1.28
PNKP-212ENST00000599454 ZNF263O14978 683 aa23.04■■□□□ 1.28
PNKP-212ENST00000599454 MATR3P43243 847 aaKnown RBP eCLIP23.04■■□□□ 1.28
PNKP-212ENST00000599454 AARSP49588 968 aaKnown RBP eCLIP23.04■■□□□ 1.28
PNKP-212ENST00000599454 CCR3P51677 355 aa23.04■■□□□ 1.28
PNKP-212ENST00000599454 ATP2C1P98194 919 aaPredicted RBP23.04■■□□□ 1.28
PNKP-212ENST00000599454 RAD51AP2Q09MP3 1159 aa23.04■■□□□ 1.28
PNKP-212ENST00000599454 ZBTB6Q15916 424 aa23.04■■□□□ 1.28
PNKP-212ENST00000599454 TSSK4Q6SA08 328 aa23.04■■□□□ 1.28
PNKP-212ENST00000599454 KIF12Q96FN5 646 aa23.04■■□□□ 1.28
PNKP-212ENST00000599454 CDK5RAP3Q96JB5 506 aa23.04■■□□□ 1.28
PNKP-212ENST00000599454 PNMA5Q96PV4 448 aa23.04■■□□□ 1.28
PNKP-212ENST00000599454 TPRP12270 2363 aaKnown RBP23.04■■□□□ 1.28
PNKP-212ENST00000599454 PRR5-ARHGAP8B1AHC4 643 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 NRG2O14511 850 aaPredicted RBP23.03■■□□□ 1.28
PNKP-212ENST00000599454 TDGF1P13385 188 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 SLC12A3P55017 1021 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 NCKAP1LP55160 1127 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 ARHGAP8P85298 464 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 LMNB2Q03252 620 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 PPP2R3AQ06190 1150 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 TEAD2Q15562 447 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 USP37Q86T82 979 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 SHKBP1Q8TBC3 707 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 BICD1Q96G01 975 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 GMEB2Q9UKD1 530 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 TSC2P49815 1807 aa23.03■■□□□ 1.28
PNKP-212ENST00000599454 ZNF638Q14966 1978 aaKnown RBP23.02■■□□□ 1.28
PNKP-212ENST00000599454 SLC26A4O43511 780 aa23.02■■□□□ 1.28
PNKP-212ENST00000599454 PLA2G4BP0C869 781 aa23.02■■□□□ 1.28
PNKP-212ENST00000599454 PAX3P23760 479 aa23.02■■□□□ 1.28
PNKP-212ENST00000599454 VIPR2P41587 438 aa23.02■■□□□ 1.28
PNKP-212ENST00000599454 EPHB3P54753 998 aa23.02■■□□□ 1.28
PNKP-212ENST00000599454 GPR17Q13304 367 aa23.02■■□□□ 1.28
PNKP-212ENST00000599454 SLITRK6Q9H5Y7 841 aa23.02■■□□□ 1.28
PNKP-212ENST00000599454 LMAN1LQ9HAT1 526 aa23.02■■□□□ 1.28
PNKP-212ENST00000599454 RAB23Q9ULC3 237 aa23.02■■□□□ 1.28
PNKP-212ENST00000599454 SCN1AP35498 2009 aa23.02■■□□□ 1.28
PNKP-212ENST00000599454 DENND4CQ5VZ89 1909 aa23.02■■□□□ 1.28
PNKP-212ENST00000599454 HEPACAM2A8MVW5 462 aa23.01■■□□□ 1.27
PNKP-212ENST00000599454 GJA1P17302 382 aa23.01■■□□□ 1.27
PNKP-212ENST00000599454 TYMPP19971 482 aa23.01■■□□□ 1.27
PNKP-212ENST00000599454 MYBPC2Q14324 1141 aa23.01■■□□□ 1.27
PNKP-212ENST00000599454 ARL6IP4Q66PJ3 421 aaKnown RBP23.01■■□□□ 1.27
PNKP-212ENST00000599454 DSTYKQ6XUX3 929 aa23.01■■□□□ 1.27
PNKP-212ENST00000599454 YAF2Q8IY57 180 aa23.01■■□□□ 1.27
PNKP-212ENST00000599454 CSGALNACT1Q8TDX6 532 aa23.01■■□□□ 1.27
PNKP-212ENST00000599454 KIF2CQ99661 725 aa23.01■■□□□ 1.27
PNKP-212ENST00000599454 LRRC3Q9BY71 257 aa23.01■■□□□ 1.27
PNKP-212ENST00000599454 HAPLN2Q9GZV7 340 aa23.01■■□□□ 1.27
PNKP-212ENST00000599454 ODF2LQ9ULJ1 636 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms