RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 PTPN21Q16825 1174 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 SLC8B1Q6J4K2 584 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 UBALD2Q8IYN6 164 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 THEM5Q8N1Q8 247 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 GOLGA5Q8TBA6 731 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 SLC7A14Q8TBB6 771 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 SAAL1Q96ER3 474 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 MFSD14AQ96MC6 490 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 BLZF1Q9H2G9 400 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 PCIF1Q9H4Z3 704 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 CYP4F11Q9HBI6 524 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 LIMD1Q9UGP4 676 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 CDH22Q9UJ99 828 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 SORCS3Q9UPU3 1222 aa15.3■□□□□ 0.04
LIG1-218ENST00000599322 OR6C75A6NL08 312 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 M0QZQ0 153 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 NFICP08651 508 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 TMEM191BP0C7N4 346 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 TYMPP19971 482 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 FSHRP23945 695 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 ADSSP30520 456 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 ZXDAP98168 799 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 ROR1Q01973 937 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 SV2CQ496J9 727 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 C9orf57Q5W0N0 161 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 OVOS1Q6IE37 1185 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 IQCEQ6IPM2 695 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 CD300LGQ6UXG3 332 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 TRIM67Q6ZTA4 783 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 BMP8AQ7Z5Y6 402 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 BRSK2Q8IWQ3 736 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 ZNF507Q8TCN5 953 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 ANKRD36BP1Q96IX9 119 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 FBXL5Q9UKA1 691 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 ZDHHC9Q9Y397 364 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 ZFP37Q9Y6Q3 630 aaPredicted RBP15.29■□□□□ 0.04
LIG1-218ENST00000599322 TRIP11Q15643 1979 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 DENND4AQ7Z401 1863 aa15.29■□□□□ 0.04
LIG1-218ENST00000599322 A0A1W2PQ27 194 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 A0A1W2PQ64 194 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 A0A1W2PQD8 194 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 GOLGA8IPA6NC78 632 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 TMEM221A6NGB7 291 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 GOLGA8JA6NMD2 632 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 M0R296 226 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 CCL16O15467 120 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 MEFVO15553 781 aaPredicted RBP15.28■□□□□ 0.04
LIG1-218ENST00000599322 ADAM12O43184 909 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 TNNC2P02585 160 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 ATF2P15336 505 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 MRE11P49959 708 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 GUCY2FP51841 1108 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 LILRA4P59901 499 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 CUL4BQ13620 913 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 MRPL58Q14197 206 aaKnown RBP15.28■□□□□ 0.04
LIG1-218ENST00000599322 GRASPQ7Z6J2 395 aaPredicted RBP15.28■□□□□ 0.04
LIG1-218ENST00000599322 FSIP1Q8NA03 581 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 HPS3Q969F9 1004 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 NXPE3Q969Y0 559 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 PAGE5Q96GU1 130 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 SENP8Q96LD8 212 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 FNBP1Q96RU3 617 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 CBWD1Q9BRT8 395 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 SLC39A2Q9NP94 309 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 IGSF9Q9P2J2 1179 aa15.28■□□□□ 0.04
LIG1-218ENST00000599322 AFF4Q9UHB7 1163 aaKnown RBP15.28■□□□□ 0.04
LIG1-218ENST00000599322 C2orf16Q68DN1 1984 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 PIRO00625 290 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 CYB561D2O14569 222 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 PRPF40AO75400 957 aaKnown RBP15.27■□□□□ 0.04
LIG1-218ENST00000599322 OAZ2O95190 189 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 KRT19P08727 400 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 POU2F2P09086 479 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 PTPN2P17706 415 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 RBP5P82980 135 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 SIGLEC14Q08ET2 396 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 MYO1EQ12965 1108 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 PLD1Q13393 1074 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 CRELD2Q6UXH1 353 aaPredicted RBP15.27■□□□□ 0.04
LIG1-218ENST00000599322 GET4Q7L5D6 327 aaPredicted RBP15.27■□□□□ 0.04
LIG1-218ENST00000599322 SUGP1Q8IWZ8 645 aaKnown RBP15.27■□□□□ 0.04
LIG1-218ENST00000599322 NELFCDQ8IXH7 590 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 CSGALNACT2Q8N6G5 542 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 ZNF707Q96C28 371 aaPredicted RBP15.27■□□□□ 0.04
LIG1-218ENST00000599322 ZNF512Q96ME7 567 aaPredicted RBP15.27■□□□□ 0.04
LIG1-218ENST00000599322 IKZF4Q9H2S9 585 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 HSPBP1Q9NZL4 362 aa15.27■□□□□ 0.04
LIG1-218ENST00000599322 HOOK1Q9UJC3 728 aaKnown RBP15.27■□□□□ 0.04
LIG1-218ENST00000599322 TIMM13Q9Y5L4 95 aaPredicted RBP15.27■□□□□ 0.04
LIG1-218ENST00000599322 ANO9A1A5B4 782 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 KPNA7A9QM74 516 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 ZNF197O14709 1029 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 ACTN4O43707 911 aaKnown RBP15.26■□□□□ 0.03
LIG1-218ENST00000599322 HUS1O60921 280 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 ABLIM3O94929 683 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 IGFBP6P24592 240 aaPredicted RBP15.26■□□□□ 0.03
LIG1-218ENST00000599322 AARSP49588 968 aaKnown RBP eCLIP15.26■□□□□ 0.03
LIG1-218ENST00000599322 MYBPC2Q14324 1141 aa15.26■□□□□ 0.03
LIG1-218ENST00000599322 KNOP1Q1ED39 458 aaKnown RBP15.26■□□□□ 0.03
LIG1-218ENST00000599322 DUOXA2Q1HG44 320 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms