RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	FIZ1	Q96SL8	496 aa		12.03	□□□□□ -0.48
GRAMD1A-209	ENST00000598580	BLOC1S4	Q9NUP1	217 aa		12.03	□□□□□ -0.48
GRAMD1A-209	ENST00000598580	FBXO4	Q9UKT5	387 aa		12.03	□□□□□ -0.48
GRAMD1A-209	ENST00000598580	SLC27A5	Q9Y2P5	690 aa		12.03	□□□□□ -0.48
GRAMD1A-209	ENST00000598580	STK24	Q9Y6E0	443 aa		12.03	□□□□□ -0.48
GRAMD1A-209	ENST00000598580	TISP43	B9A030	160 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SOAT2	O75908	522 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MYL4	P12829	197 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	NCKAP1L	P55160	1127 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ERICH6B	Q5W0A0	696 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SCARA3	Q6AZY7	606 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MCTP1	Q6DN14	999 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZNF852	Q6ZMS4	543 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	HAUS6	Q7Z4H7	955 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SMARCD2	Q92925	531 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	KCNN1	Q92952	543 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PGLYRP2	Q96PD5	576 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MKNK1	Q9BUB5	465 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	RAB34	Q9BZG1	259 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TRPV4	Q9HBA0	871 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZFP14	Q9HCL3	533 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZNF334	Q9HCZ1	680 aa	Predicted RBP	12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PRMT8	Q9NR22	394 aa	Predicted RBP	12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	C2orf42	Q9NWW7	574 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	DLL3	Q9NYJ7	618 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	YIPF1	Q9Y548	306 aa		12.02	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ANKRD63	C9JTQ0	380 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CLDN3	O15551	220 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CLTA	P09496	248 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	GDI1	P31150	447 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	RPS9	P46781	194 aa	Known RBP	12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	STRN3	Q13033	797 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	DUSP4	Q13115	394 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CENPP	Q6IPU0	288 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZNF280D	Q6N043	979 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	GAREM2	Q75VX8	874 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PDZD4	Q76G19	769 aa	Predicted RBP	12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ATAD1	Q8NBU5	361 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	APPL2	Q8NEU8	664 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	KIF12	Q96FN5	646 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TMX3	Q96JJ7	454 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZNF512	Q96ME7	567 aa	Predicted RBP	12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	NELL2	Q99435	816 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	REEP2	Q9BRK0	252 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TRMT61B	Q9BVS5	477 aa	Known RBP	12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TIPIN	Q9BVW5	301 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	BRD9	Q9H8M2	597 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PLEKHA5	Q9HAU0	1116 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZSCAN32	Q9NX65	697 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	DAXX	Q9UER7	740 aa	Predicted RBP	12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TBX20	Q9UMR3	447 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	NDRG2	Q9UN36	371 aa	Known RBP	12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ACACB	O00763	2458 aa		12.01	□□□□□ -0.49
GRAMD1A-209	ENST00000598580		A0A0B4J269	797 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	HEPACAM2	A8MVW5	462 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZNF197	O14709	1029 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PIGR	P01833	764 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CHRNB1	P11230	501 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PSMC3	P17980	439 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	GJB2	P29033	226 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SOX9	P48436	509 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZNF131	P52739	623 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	DMWD	Q09019	674 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	GPR17	Q13304	367 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MCM6	Q14566	821 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	RILPL1	Q5EBL4	403 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CYP4A22	Q5TCH4	519 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZC3H14	Q6PJT7	736 aa	Known RBP	12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	USP49	Q70CQ1	688 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	OR10T2	Q8NGX3	314 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	DNASE1L2	Q92874	299 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CHRD	Q9H2X0	955 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	LMAN1L	Q9HAT1	526 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PARD6A	Q9NPB6	346 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TRPV5	Q9NQA5	729 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CPSF3	Q9UKF6	684 aa	Known RBP	12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PCDHGA2	Q9Y5H1	932 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	COL4A2	P08572	1712 aa		12	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CHD8	Q9HCK8	2581 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580		A0A1W2PRU2	124 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MTMR11	A4FU01	709 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	PIR	O00625	290 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	KIN	O60870	393 aa	Known RBP	11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	NFIC	P08651	508 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CPB1	P15086	417 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	CYP3A5	P20815	502 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MARCKS	P29966	332 aa	Predicted RBP	11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	NMT1	P30419	496 aa	Known RBP	11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SMTN	P53814	917 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	LILRA4	P59901	499 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	YWHAH	Q04917	246 aa	Predicted RBP	11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	DHX8	Q14562	1220 aa	Known RBP	11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	SPATA1	Q5VX52	437 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	JADE1	Q6IE81	842 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	TXNDC11	Q6PKC3	985 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	MAMSTR	Q6ZN01	415 aa		11.99	□□□□□ -0.49
GRAMD1A-209	ENST00000598580	LRRTM3	Q86VH5	581 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms