RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 SENP8Q96LD8 212 aa24.66■■□□□ 1.54
IRF3-220ENST00000598108 RIPOR3Q96MK2 946 aa24.66■■□□□ 1.54
IRF3-220ENST00000598108 KIAA1586Q9HCI6 787 aa24.66■■□□□ 1.54
IRF3-220ENST00000598108 VWA8A3KMH1 1905 aa24.66■■□□□ 1.54
IRF3-220ENST00000598108 PTPRJQ12913 1337 aa24.65■■□□□ 1.54
IRF3-220ENST00000598108 H7C4K7 107 aa24.65■■□□□ 1.54
IRF3-220ENST00000598108 OAZ2O95190 189 aa24.65■■□□□ 1.54
IRF3-220ENST00000598108 PAPLNO95428 1278 aa24.65■■□□□ 1.54
IRF3-220ENST00000598108 SP100P23497 879 aaPredicted RBP24.65■■□□□ 1.54
IRF3-220ENST00000598108 SNRNP35Q16560 246 aaKnown RBP24.65■■□□□ 1.54
IRF3-220ENST00000598108 CTXN3Q4LDR2 81 aa24.65■■□□□ 1.54
IRF3-220ENST00000598108 XXYLT1Q8NBI6 393 aa24.65■■□□□ 1.54
IRF3-220ENST00000598108 BORCS6Q96GS4 357 aa24.65■■□□□ 1.54
IRF3-220ENST00000598108 NECTIN4Q96NY8 510 aa24.65■■□□□ 1.54
IRF3-220ENST00000598108 POP1Q99575 1024 aaKnown RBP24.65■■□□□ 1.54
IRF3-220ENST00000598108 CGNQ9P2M7 1197 aaKnown RBP24.65■■□□□ 1.54
IRF3-220ENST00000598108 ZMYND10O75800 440 aa24.64■■□□□ 1.54
IRF3-220ENST00000598108 ARPP19P56211 112 aa24.64■■□□□ 1.54
IRF3-220ENST00000598108 ROR1Q01973 937 aa24.64■■□□□ 1.54
IRF3-220ENST00000598108 KCNB1Q14721 858 aa24.64■■□□□ 1.54
IRF3-220ENST00000598108 C15orf39Q6ZRI6 1047 aa24.64■■□□□ 1.54
IRF3-220ENST00000598108 OR5B17Q8NGF7 314 aa24.64■■□□□ 1.54
IRF3-220ENST00000598108 CACTINQ8WUQ7 758 aaKnown RBP24.64■■□□□ 1.54
IRF3-220ENST00000598108 ERCC4Q92889 916 aaPredicted RBP24.64■■□□□ 1.54
IRF3-220ENST00000598108 CCDC47Q96A33 483 aaKnown RBP24.64■■□□□ 1.54
IRF3-220ENST00000598108 MTMR12Q9C0I1 747 aa24.64■■□□□ 1.54
IRF3-220ENST00000598108 DMAC2Q9NW81 257 aa24.64■■□□□ 1.54
IRF3-220ENST00000598108 SIX4Q9UIU6 781 aa24.64■■□□□ 1.54
IRF3-220ENST00000598108 MAPK8IP1Q9UQF2 711 aa24.64■■□□□ 1.54
IRF3-220ENST00000598108 PDCD11Q14690 1871 aaKnown RBP24.64■■□□□ 1.53
IRF3-220ENST00000598108 WDR27A2RRH5 827 aa24.63■■□□□ 1.53
IRF3-220ENST00000598108 ITGB3P05106 788 aa24.63■■□□□ 1.53
IRF3-220ENST00000598108 POLR2BP30876 1174 aaKnown RBP24.63■■□□□ 1.53
IRF3-220ENST00000598108 YWHAHQ04917 246 aaPredicted RBP24.63■■□□□ 1.53
IRF3-220ENST00000598108 CYP24A1Q07973 514 aa24.63■■□□□ 1.53
IRF3-220ENST00000598108 ELMSAN1Q6PJG2 1045 aa24.63■■□□□ 1.53
IRF3-220ENST00000598108 CSGALNACT2Q8N6G5 542 aa24.63■■□□□ 1.53
IRF3-220ENST00000598108 GZF1Q9H116 711 aaPredicted RBP24.63■■□□□ 1.53
IRF3-220ENST00000598108 INTS13Q9NVM9 706 aa24.63■■□□□ 1.53
IRF3-220ENST00000598108 ZDHHC7Q9NXF8 308 aa24.63■■□□□ 1.53
IRF3-220ENST00000598108 AGAP1Q9UPQ3 857 aa24.63■■□□□ 1.53
IRF3-220ENST00000598108 ABLIM3O94929 683 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 C8AP07357 584 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 TYMPP19971 482 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 TAF6P49848 677 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 ZNF280DQ6N043 979 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 RNF135Q8IUD6 432 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 ZNF461Q8TAF7 563 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 GOLGA5Q8TBA6 731 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 SMG7Q92540 1137 aaKnown RBP24.62■■□□□ 1.53
IRF3-220ENST00000598108 TIGD1Q96MW7 591 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 RHOBTB2Q9BYZ6 727 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 PRKD2Q9BZL6 878 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 TSHZ2Q9NRE2 1034 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 PLXNA3P51805 1871 aa24.62■■□□□ 1.53
IRF3-220ENST00000598108 PDXKO00764 312 aa24.61■■□□□ 1.53
IRF3-220ENST00000598108 CYB561D2O14569 222 aa24.61■■□□□ 1.53
IRF3-220ENST00000598108 EXOC3O60645 756 aa24.61■■□□□ 1.53
IRF3-220ENST00000598108 PAX3P23760 479 aa24.61■■□□□ 1.53
IRF3-220ENST00000598108 PSMD6Q15008 389 aa24.61■■□□□ 1.53
IRF3-220ENST00000598108 SURF1Q15526 300 aa24.61■■□□□ 1.53
IRF3-220ENST00000598108 USP37Q86T82 979 aa24.61■■□□□ 1.53
IRF3-220ENST00000598108 SLC7A14Q8TBB6 771 aa24.61■■□□□ 1.53
IRF3-220ENST00000598108 CCDC127Q96BQ5 260 aa24.61■■□□□ 1.53
IRF3-220ENST00000598108 CCDC34Q96HJ3 373 aa24.61■■□□□ 1.53
IRF3-220ENST00000598108 MFSD14AQ96MC6 490 aa24.61■■□□□ 1.53
IRF3-220ENST00000598108 EPHX3Q9H6B9 360 aa24.61■■□□□ 1.53
IRF3-220ENST00000598108 KPNA7A9QM74 516 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 C2CD4DB7Z1M9 353 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 SEC24AO95486 1093 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 OR4Q2P0C623 313 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 DLATP10515 647 aaKnown RBP24.6■■□□□ 1.53
IRF3-220ENST00000598108 ODC1P11926 461 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 DUOXA2Q1HG44 320 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 PPM1LQ5SGD2 360 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 LIN9Q5TKA1 542 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 OVOS1Q6IE37 1185 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 CYP26C1Q6V0L0 522 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 SLC9A9Q8IVB4 645 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 SMYD4Q8IYR2 804 aaPredicted RBP24.6■■□□□ 1.53
IRF3-220ENST00000598108 PLEKHO2Q8TD55 490 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 TMEM174Q8WUU8 243 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 ITGA11Q9UKX5 1188 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 PCDHA5Q9Y5H7 936 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 ANK1P16157 1881 aa24.6■■□□□ 1.53
IRF3-220ENST00000598108 CCL16O15467 120 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 NR3C1P04150 777 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 CYP11A1P05108 521 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 KRT19P08727 400 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 TMEM191BP0C7N4 346 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 ATF2P15336 505 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 RBP5P82980 135 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 UVSSAQ2YD98 709 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 WSCD1Q658N2 575 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 RNF19BQ6ZMZ0 732 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 WDR49Q8IV35 697 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 GUF1Q8N442 669 aaKnown RBP24.59■■□□□ 1.53
IRF3-220ENST00000598108 SPATA20Q8TB22 786 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 ZNF516Q92618 1163 aa24.59■■□□□ 1.53
IRF3-220ENST00000598108 ANKRD36BP1Q96IX9 119 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms