RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 TRAPPC11Q7Z392 1133 aa18.08■□□□□ 0.48
CAPN12-206ENST00000597354 FAM186BQ8IYM0 893 aa18.08■□□□□ 0.48
CAPN12-206ENST00000597354 CXorf38Q8TB03 319 aa18.08■□□□□ 0.48
CAPN12-206ENST00000597354 PARD3BQ8TEW8 1205 aa18.08■□□□□ 0.48
CAPN12-206ENST00000597354 SLC22A17Q8WUG5 538 aa18.08■□□□□ 0.48
CAPN12-206ENST00000597354 TMEM174Q8WUU8 243 aa18.08■□□□□ 0.48
CAPN12-206ENST00000597354 DHTKD1Q96HY7 919 aaPredicted RBP18.08■□□□□ 0.48
CAPN12-206ENST00000597354 SENP8Q96LD8 212 aa18.08■□□□□ 0.48
CAPN12-206ENST00000597354 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.08■□□□□ 0.48
CAPN12-206ENST00000597354 ITGA11Q9UKX5 1188 aa18.08■□□□□ 0.48
CAPN12-206ENST00000597354 PCDHB8Q9UN66 801 aa18.08■□□□□ 0.48
CAPN12-206ENST00000597354 M0QZQ0 153 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 SYN3O14994 580 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 CETN3O15182 167 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 ADH1AP07327 375 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 OR1D2P34982 312 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 PSMC2P35998 433 aaKnown RBP18.07■□□□□ 0.48
CAPN12-206ENST00000597354 AARSP49588 968 aaKnown RBP eCLIP18.07■□□□□ 0.48
CAPN12-206ENST00000597354 KCNQ1P51787 676 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 CLCN4P51793 760 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 ARPP19P56211 112 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 RBP5P82980 135 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 ANKS3Q6ZW76 656 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 C12orf76Q8N812 135 aaPredicted RBP18.07■□□□□ 0.48
CAPN12-206ENST00000597354 TRIML1Q8N9V2 468 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 MMRN2Q9H8L6 949 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 FNIP2Q9P278 1114 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 R3HCC1Q9Y3T6 440 aaKnown RBP18.07■□□□□ 0.48
CAPN12-206ENST00000597354 CDY1Q9Y6F8 540 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 PLXNA3P51805 1871 aa18.07■□□□□ 0.48
CAPN12-206ENST00000597354 KPNA7A9QM74 516 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 CYB561D2O14569 222 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 CST3P01034 146 aaPredicted RBP18.06■□□□□ 0.48
CAPN12-206ENST00000597354 TRIM49P0CI25 452 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 TRIM49CP0CI26 452 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 VAMP7P51809 220 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 BIRC3Q13489 604 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 SV2CQ496J9 727 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 CTXN3Q4LDR2 81 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 PPFIBP1Q86W92 1011 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 APPL2Q8NEU8 664 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.06■□□□□ 0.48
CAPN12-206ENST00000597354 CASP10Q92851 521 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 ELMO3Q96BJ8 720 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 BORCS6Q96GS4 357 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 ZNF560Q96MR9 790 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 MTRRQ9UBK8 725 aa18.06■□□□□ 0.48
CAPN12-206ENST00000597354 PRUNE2Q8WUY3 3088 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 SPTBN5Q9NRC6 3674 aaKnown RBP18.05■□□□□ 0.48
CAPN12-206ENST00000597354 SPDYE4A6NLX3 237 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 TGM5O43548 720 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 PHACTR2O75167 634 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 CLSTN1O94985 981 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 GLUD1P00367 558 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 SRGAP2BP0DMP2 458 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 ODC1P11926 461 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 KRT13P13646 458 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 PPP1R2P41236 205 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 MRPS5P82675 430 aaKnown RBP18.05■□□□□ 0.48
CAPN12-206ENST00000597354 FKBP3Q00688 224 aaKnown RBP18.05■□□□□ 0.48
CAPN12-206ENST00000597354 CREMQ03060 361 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 YWHAHQ04917 246 aaPredicted RBP18.05■□□□□ 0.48
CAPN12-206ENST00000597354 LRRC63Q05C16 580 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 PAK1Q13153 545 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 C1orf220Q5T0J3 134 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 ANKRD54Q6NXT1 300 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 PDXDC1Q6P996 788 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 USP37Q86T82 979 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 GPR65Q8IYL9 337 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 FEZF2Q8TBJ5 459 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 HPDLQ96IR7 371 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 DUSP9Q99956 384 aaKnown RBP18.05■□□□□ 0.48
CAPN12-206ENST00000597354 MAN1C1Q9NR34 630 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 CD207Q9UJ71 328 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 CDH22Q9UJ99 828 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 FBXL5Q9UKA1 691 aa18.05■□□□□ 0.48
CAPN12-206ENST00000597354 FSD2A1L4K1 749 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 H7C4K7 107 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 MBD3O95983 291 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 C4BPAP04003 597 aaKnown RBP18.04■□□□□ 0.48
CAPN12-206ENST00000597354 EPB41P11171 864 aaKnown RBP18.04■□□□□ 0.48
CAPN12-206ENST00000597354 PNPLA4P41247 253 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 CDR1P51861 262 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 TRPC3Q13507 836 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 MRPL58Q14197 206 aaKnown RBP18.04■□□□□ 0.48
CAPN12-206ENST00000597354 LEXMQ3ZCV2 418 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 RARS2Q5T160 578 aaKnown RBP18.04■□□□□ 0.48
CAPN12-206ENST00000597354 TDRD10Q5VZ19 366 aaKnown RBP18.04■□□□□ 0.48
CAPN12-206ENST00000597354 WSCD1Q658N2 575 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 ZNF280DQ6N043 979 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 TTI2Q6NXR4 508 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 SYCE2Q6PIF2 218 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 TMEM184AQ6ZMB5 413 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 INTS8Q75QN2 995 aaKnown RBP18.04■□□□□ 0.48
CAPN12-206ENST00000597354 LRRC52Q8N7C0 313 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 TMC2Q8TDI7 906 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 ATXN2LQ8WWM7 1075 aaKnown RBP18.04■□□□□ 0.48
CAPN12-206ENST00000597354 MSLNLQ96KJ4 702 aa18.04■□□□□ 0.48
CAPN12-206ENST00000597354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.04■□□□□ 0.487e-6■■■■■ 74.5
CAPN12-206ENST00000597354 SNX9Q9Y5X1 595 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms