RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 TRIM67Q6ZTA4 783 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 HS2ST1Q7LGA3 356 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 UBALD2Q8IYN6 164 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 ELMOD1Q8N336 334 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 ZNF507Q8TCN5 953 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 ZNF707Q96C28 371 aaPredicted RBP18.78■□□□□ 0.6
IRF3-208ENST00000594387 ZNF560Q96MR9 790 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 IKZF4Q9H2S9 585 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 DSEQ9UL01 958 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 MAFFQ9ULX9 164 aa18.78■□□□□ 0.6
IRF3-208ENST00000594387 GOLGA8IPA6NC78 632 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 ZNF233A6NK53 670 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 GOLGA8JA6NMD2 632 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 PIRO00625 290 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 CCL16O15467 120 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 MYL1P05976 194 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 ATF2P15336 505 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 TYMPP19971 482 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 FSHRP23945 695 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 SNRPFP62306 86 aaKnown RBP18.77■□□□□ 0.6
IRF3-208ENST00000594387 SIGLEC14Q08ET2 396 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 MRPL58Q14197 206 aaKnown RBP18.77■□□□□ 0.6
IRF3-208ENST00000594387 OVOS1Q6IE37 1185 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 CRELD2Q6UXH1 353 aaPredicted RBP18.77■□□□□ 0.6
IRF3-208ENST00000594387 BRSK2Q8IWQ3 736 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 HPS3Q969F9 1004 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 SENP8Q96LD8 212 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 MFSD14AQ96MC6 490 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 FGFBP2Q9BYJ0 223 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 CYP4F11Q9HBI6 524 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 EXOC1Q9NV70 894 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 IGSF9Q9P2J2 1179 aa18.77■□□□□ 0.6
IRF3-208ENST00000594387 ZFP37Q9Y6Q3 630 aaPredicted RBP18.77■□□□□ 0.6
IRF3-208ENST00000594387 SPTBN5Q9NRC6 3674 aaKnown RBP18.77■□□□□ 0.59
IRF3-208ENST00000594387 DOCK8Q8NF50 2099 aa18.77■□□□□ 0.59
IRF3-208ENST00000594387 VCANP13611 3396 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 OR6C75A6NL08 312 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 ABLIM3O94929 683 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 OAZ2O95190 189 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 PAPLNO95428 1278 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 PNPLA4P41247 253 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 PSMD2Q13200 908 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 CUL4BQ13620 913 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 SV2CQ496J9 727 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 RSPO2Q6UXX9 243 aaPredicted RBP18.76■□□□□ 0.59
IRF3-208ENST00000594387 GET4Q7L5D6 327 aaPredicted RBP18.76■□□□□ 0.59
IRF3-208ENST00000594387 GRASPQ7Z6J2 395 aaPredicted RBP18.76■□□□□ 0.59
IRF3-208ENST00000594387 THEM5Q8N1Q8 247 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 PAGE5Q96GU1 130 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 CBWD1Q9BRT8 395 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 SLC39A2Q9NP94 309 aa18.76■□□□□ 0.59
IRF3-208ENST00000594387 CGNQ9P2M7 1197 aaKnown RBP18.76■□□□□ 0.59
IRF3-208ENST00000594387 TIMM13Q9Y5L4 95 aaPredicted RBP18.76■□□□□ 0.59
IRF3-208ENST00000594387 WDR27A2RRH5 827 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 TMEM221A6NGB7 291 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 M0R296 226 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 POU2F2P09086 479 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 TMEM191BP0C7N4 346 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 PTPN2P17706 415 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 CASP1P29466 404 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 AARSP49588 968 aaKnown RBP eCLIP18.75■□□□□ 0.592e-7■■■■□ 26.2
IRF3-208ENST00000594387 NELFCDQ8IXH7 590 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 TCEAL8Q8IYN2 117 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 PBXIP1Q96AQ6 731 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 ANKRD36BP1Q96IX9 119 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 C11orf16Q9NQ32 467 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 HSPBP1Q9NZL4 362 aa18.75■□□□□ 0.59
IRF3-208ENST00000594387 AFF4Q9UHB7 1163 aaKnown RBP18.75■□□□□ 0.59
IRF3-208ENST00000594387 A0A1W2PQ27 194 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 A0A1W2PQ64 194 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 A0A1W2PQD8 194 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 ANO9A1A5B4 782 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 CYB561D2O14569 222 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 ACTN4O43707 911 aaKnown RBP18.74■□□□□ 0.59
IRF3-208ENST00000594387 TBC1D4O60343 1298 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 KIF20AO95235 890 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 TNNC2P02585 160 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 ASGR2P07307 311 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 KRT19P08727 400 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 ADCY1Q08828 1119 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 TDGQ13569 410 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 IQCEQ6IPM2 695 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 EPM2AIP1Q7L775 607 aaPredicted RBP18.74■□□□□ 0.59
IRF3-208ENST00000594387 SUGP1Q8IWZ8 645 aaKnown RBP18.74■□□□□ 0.59
IRF3-208ENST00000594387 GRAMD1CQ8IYS0 662 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 FSIP1Q8NA03 581 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 NXPE3Q969Y0 559 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 ZNF512Q96ME7 567 aaPredicted RBP18.74■□□□□ 0.59
IRF3-208ENST00000594387 AGAP1Q9UPQ3 857 aa18.74■□□□□ 0.59
IRF3-208ENST00000594387 TSC2P49815 1807 aa18.73■□□□□ 0.59
IRF3-208ENST00000594387 KPNA7A9QM74 516 aa18.73■□□□□ 0.59
IRF3-208ENST00000594387 PPEF2O14830 753 aa18.73■□□□□ 0.59
IRF3-208ENST00000594387 RBP5P82980 135 aa18.73■□□□□ 0.59
IRF3-208ENST00000594387 PLD1Q13393 1074 aa18.73■□□□□ 0.59
IRF3-208ENST00000594387 MYBPC2Q14324 1141 aa18.73■□□□□ 0.59
IRF3-208ENST00000594387 PABPC1LQ4VXU2 614 aaKnown RBP18.73■□□□□ 0.59
IRF3-208ENST00000594387 EFCAB13Q8IY85 973 aa18.73■□□□□ 0.59
IRF3-208ENST00000594387 CSGALNACT2Q8N6G5 542 aa18.73■□□□□ 0.59
IRF3-208ENST00000594387 RDH13Q8NBN7 331 aa18.73■□□□□ 0.59
IRF3-208ENST00000594387 GLIS3Q8NEA6 775 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms