RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 PAG1Q9NWQ8 432 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 FTSJ1Q9UET6 329 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 ADAM28Q9UKQ2 775 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 SSUH2Q9Y2M2 353 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.47□□□□□ -1.85
VRK3-204ENST00000593912 ANK1P16157 1881 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 CUBNO60494 3623 aa3.46□□□□□ -1.85
VRK3-204ENST00000593912 MYH9P35579 1960 aaKnown RBP3.46□□□□□ -1.86
VRK3-204ENST00000593912 ZNF638Q14966 1978 aaKnown RBP3.46□□□□□ -1.86
VRK3-204ENST00000593912 A0A087X0B3 334 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 A0A1W2PRU2 124 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 ARHGAP10A1A4S6 786 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 M0R2C6 588 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 DPYSL4O14531 572 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 ENC1O14682 589 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 DHX16O60231 1041 aaKnown RBP3.46□□□□□ -1.86
VRK3-204ENST00000593912 HBP1O60381 514 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 RTN2O75298 545 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 RFPL3O75679 317 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 RECQL4O94761 1208 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 SEC24AO95486 1093 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 CER1O95813 267 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 APPP05067 770 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 PRKCBP05771 671 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 IFIT2P09913 472 aaKnown RBP3.46□□□□□ -1.86
VRK3-204ENST00000593912 ZNF883P0CG24 379 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 DRD2P14416 443 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 ATP4AP20648 1035 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 DRD1P21728 446 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 GNLYP22749 145 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 GLDCP23378 1020 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 IGFBP6P24592 240 aaPredicted RBP3.46□□□□□ -1.86
VRK3-204ENST00000593912 MLH1P40692 756 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 CASRP41180 1078 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 GPC3P51654 580 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 ACTR2P61160 394 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 GABREP78334 506 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 SCRN1Q12765 414 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 RUNX3Q13761 415 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 RAB33AQ14088 237 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 UBE3CQ15386 1083 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 SF3A1Q15459 793 aaKnown RBP3.46□□□□□ -1.86
VRK3-204ENST00000593912 CRY1Q16526 586 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 ARL13BQ3SXY8 428 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 FBXO43Q4G163 708 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 SPDYCQ5MJ68 293 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 CYP4A22Q5TCH4 519 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 LMBRD2Q68DH5 695 aaPredicted RBP3.46□□□□□ -1.86
VRK3-204ENST00000593912 GIMAP6Q6P9H5 292 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 USP33Q8TEY7 942 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 PDCD6IPQ8WUM4 868 aaKnown RBP3.46□□□□□ -1.86
VRK3-204ENST00000593912 NLRP7Q8WX94 980 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 RSPH1Q8WYR4 309 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 OSBP2Q969R2 916 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 RNF166Q96A37 237 aaPredicted RBP3.46□□□□□ -1.86
VRK3-204ENST00000593912 ZFP42Q96MM3 310 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 ZNF578Q96N58 590 aaPredicted RBP3.46□□□□□ -1.86
VRK3-204ENST00000593912 SEMA3CQ99985 751 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 P2RY13Q9BPV8 354 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 COLEC11Q9BWP8 271 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 DPH1Q9BZG8 443 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 BOLA2Q9H3K6 86 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 KDM4CQ9H3R0 1056 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 JMJD4Q9H9V9 463 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 DONSONQ9NYP3 566 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 CEP72Q9P209 647 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 MMP17Q9ULZ9 603 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 HDAC5Q9UQL6 1122 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 PCDHB2Q9Y5E7 798 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 CDY1Q9Y6F8 540 aa3.46□□□□□ -1.86
VRK3-204ENST00000593912 SF3B1O75533 1304 aaKnown RBP eCLIP3.45□□□□□ -1.86
VRK3-204ENST00000593912 MN1Q10571 1320 aaPredicted RBP3.45□□□□□ -1.86
VRK3-204ENST00000593912 BAZ2BQ9UIF8 2168 aaKnown RBP3.45□□□□□ -1.86
VRK3-204ENST00000593912 IGHV1OR15-9A0A0B4J2B8 117 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 A0A1B0GVT2 93 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 TCRBV21S2A2A0A5A6 115 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 ARHGEF37A1IGU5 675 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 ARL5CA6NH57 179 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 GCOM1H8Y6P7 765 aaPredicted RBP3.45□□□□□ -1.86
VRK3-204ENST00000593912 SGK1O00141 431 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 PRRG1O14668 218 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 GPAA1O43292 621 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 ZNF623O75123 536 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 TADA2AO75478 443 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 STAM2O75886 525 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 ALDH1A2O94788 518 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 MICAL2O94851 1124 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 KIF4AO95239 1232 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 NADKO95544 446 aaPredicted RBP3.45□□□□□ -1.86
VRK3-204ENST00000593912 KRT7P08729 469 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 GNAI3P08754 354 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 POLR2MP0CAP2 368 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 GJA4P35212 333 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 GRK6P43250 576 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 ACADVLP49748 655 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 ARPP19P56211 112 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 CYP4F2P78329 520 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 DRP2Q13474 957 aa3.45□□□□□ -1.86
VRK3-204ENST00000593912 NAA30Q147X3 362 aaPredicted RBP3.45□□□□□ -1.86
VRK3-204ENST00000593912 TESK1Q15569 626 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms