RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 MRPL58Q14197 206 aaKnown RBP16.06■□□□□ 0.16
PNKP-202ENST00000593706 PPP2R5DQ14738 602 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 RSPO4Q2I0M5 234 aaPredicted RBP16.06■□□□□ 0.16
PNKP-202ENST00000593706 MCTP1Q6DN14 999 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 POTEHQ6S545 545 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 LEMD2Q8NC56 503 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 ZBTB44Q8NCP5 570 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 SMARCD2Q92925 531 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 CDK5RAP3Q96JB5 506 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 EPC1Q9H2F5 836 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 PRMT8Q9NR22 394 aaPredicted RBP16.06■□□□□ 0.16
PNKP-202ENST00000593706 PCDHB8Q9UN66 801 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 GTF3C3Q9Y5Q9 886 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 EPG5Q9HCE0 2579 aa16.06■□□□□ 0.16
PNKP-202ENST00000593706 H3BQV1 296 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 MEFVO15553 781 aaPredicted RBP16.05■□□□□ 0.16
PNKP-202ENST00000593706 PLS3P13797 630 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 SLC10A6Q3KNW5 377 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 LARP1BQ659C4 914 aaKnown RBP16.05■□□□□ 0.16
PNKP-202ENST00000593706 VITQ6UXI7 678 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 ZPBP2Q6X784 338 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 RNF19BQ6ZMZ0 732 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 USP37Q86T82 979 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 HS6ST3Q8IZP7 471 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 GPR161Q8N6U8 529 aaKnown RBP16.05■□□□□ 0.16
PNKP-202ENST00000593706 ZSCAN18Q8TBC5 510 aaPredicted RBP16.05■□□□□ 0.16
PNKP-202ENST00000593706 SPIRE2Q8WWL2 714 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 CEP72Q9P209 647 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 KCNG1Q9UIX4 513 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 MAFFQ9ULX9 164 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 YIPF1Q9Y548 306 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 PIAS3Q9Y6X2 628 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 GREB1Q4ZG55 1949 aa16.05■□□□□ 0.16
PNKP-202ENST00000593706 ACACBO00763 2458 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 MAPTP10636 758 aaKnown RBP16.04■□□□□ 0.16
PNKP-202ENST00000593706 GJA1P17302 382 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 PPP2R3AQ06190 1150 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 SPAG1Q07617 926 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 PLD1Q13393 1074 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 TEAD2Q15562 447 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 YAF2Q8IY57 180 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 TMEM161BQ8NDZ6 487 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 DEPDC1BQ8WUY9 529 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 FAM3CQ92520 227 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 KIF12Q96FN5 646 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 ZSWIM3Q96MP5 696 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 PGLYRP2Q96PD5 576 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 FAM126AQ9BYI3 521 aaPredicted RBP16.04■□□□□ 0.16
PNKP-202ENST00000593706 CHRDQ9H2X0 955 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 ZNF334Q9HCZ1 680 aaPredicted RBP16.04■□□□□ 0.16
PNKP-202ENST00000593706 DLL3Q9NYJ7 618 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 RAB23Q9ULC3 237 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 USP18Q9UMW8 372 aa16.04■□□□□ 0.16
PNKP-202ENST00000593706 TIMM13Q9Y5L4 95 aaPredicted RBP16.04■□□□□ 0.16
PNKP-202ENST00000593706 H0YCG3 227 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 NRG2O14511 850 aaPredicted RBP16.03■□□□□ 0.16
PNKP-202ENST00000593706 ZNF263O14978 683 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 HNRNPDLO14979 420 aaKnown RBP16.03■□□□□ 0.16
PNKP-202ENST00000593706 XPOTO43592 962 aaKnown RBP16.03■□□□□ 0.16
PNKP-202ENST00000593706 LILRB5O75023 590 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 SDHBP21912 280 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 VIPR2P41587 438 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 NRLP54845 237 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 MCL1Q07820 350 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 HYIQ5T013 277 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 BRAPQ7Z569 592 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 CSGALNACT1Q8TDX6 532 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 PLIN2Q99541 437 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 NTPCRQ9BSD7 190 aaKnown RBP16.03■□□□□ 0.16
PNKP-202ENST00000593706 IER2Q9BTL4 223 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 OXCT2Q9BYC2 517 aaPredicted RBP16.03■□□□□ 0.16
PNKP-202ENST00000593706 PLEKHA5Q9HAU0 1116 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 TRPV5Q9NQA5 729 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 KCND2Q9NZV8 630 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 GMEB2Q9UKD1 530 aa16.03■□□□□ 0.16
PNKP-202ENST00000593706 UBQLN1Q9UMX0 589 aaKnown RBP16.03■□□□□ 0.16
PNKP-202ENST00000593706 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.03■□□□□ 0.16
PNKP-202ENST00000593706 EML5Q05BV3 1969 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 MYO16Q9Y6X6 1858 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 VWA3AA6NCI4 1184 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 SHISA7A6NL88 538 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 M0QZQ0 153 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 CLTAP09496 248 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 OR4Q2P0C623 313 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 LIG4P49917 911 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 CCR3P51677 355 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 EPHB3P54753 998 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 EPHA5P54756 1037 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
PNKP-202ENST00000593706 LMNB2Q03252 620 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 FZD5Q13467 585 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 ARL6IP4Q66PJ3 421 aaKnown RBP16.02■□□□□ 0.16
PNKP-202ENST00000593706 DSTYKQ6XUX3 929 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 MAP4K3Q8IVH8 894 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 TMEM130Q8N3G9 435 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 SYT2Q8N9I0 419 aaPredicted RBP16.02■□□□□ 0.16
PNKP-202ENST00000593706 SHKBP1Q8TBC3 707 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 NELL1Q92832 810 aa16.02■□□□□ 0.16
PNKP-202ENST00000593706 INTS4Q96HW7 963 aaKnown RBP16.02■□□□□ 0.16
PNKP-202ENST00000593706 GPR88Q9GZN0 384 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms