RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 C1orf112Q9NSG2 853 aa14.48□□□□□ -0.09
VMP1-217ENST00000593168 ARHGAP20Q9P2F6 1191 aa14.48□□□□□ -0.09
VMP1-217ENST00000593168 IPPQ9Y573 584 aa14.48□□□□□ -0.09
VMP1-217ENST00000593168 EPN1Q9Y6I3 576 aaPredicted RBP14.48□□□□□ -0.09
VMP1-217ENST00000593168 CITO14578 2027 aa14.48□□□□□ -0.09
VMP1-217ENST00000593168 F8VZ95 297 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 CCP110O43303 1012 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 LPXNO60711 386 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 ZNF623O75123 536 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 ASS1P00966 412 aaKnown RBP14.47□□□□□ -0.09
VMP1-217ENST00000593168 CST3P01034 146 aaPredicted RBP14.47□□□□□ -0.09
VMP1-217ENST00000593168 NFICP08651 508 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 GHRP10912 638 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 CD52P31358 61 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 CYLC1P35663 651 aaPredicted RBP14.47□□□□□ -0.09
VMP1-217ENST00000593168 TRPC3Q13507 836 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 DSC3Q14574 896 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 TMEM132DQ14C87 1099 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 PPM1KQ8N3J5 372 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 SMG8Q8ND04 991 aaKnown RBP14.47□□□□□ -0.09
VMP1-217ENST00000593168 TAF4BQ92750 862 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 TATDN2Q93075 761 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 JAKMIP2Q96AA8 810 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 FAXDC2Q96IV6 333 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 SNX27Q96L92 541 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 CCDC42Q96M95 316 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 KREMEN1Q96MU8 473 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 PI4K2AQ9BTU6 479 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 IMPG2Q9BZV3 1241 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 GPR88Q9GZN0 384 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 NXF3Q9H4D5 531 aaKnown RBP14.47□□□□□ -0.09
VMP1-217ENST00000593168 NHEJ1Q9H9Q4 299 aaPredicted RBP14.47□□□□□ -0.09
VMP1-217ENST00000593168 FAM105AQ9NUU6 356 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 CNTN3Q9P232 1028 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 PCDHB2Q9Y5E7 798 aa14.47□□□□□ -0.09
VMP1-217ENST00000593168 PITPNM1O00562 1244 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 ZSCAN12O43309 604 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 RECQL4O94761 1208 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 KCNE1P15382 129 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 SELPP16109 830 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 ANXA13P27216 316 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 RAB27AP51159 221 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 MTF1Q14872 753 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 ZBTB6Q15916 424 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 ARHGAP44Q17R89 818 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 MRPL10Q7Z7H8 261 aaKnown RBP14.46□□□□□ -0.09
VMP1-217ENST00000593168 CCAR2Q8N163 923 aaKnown RBP14.46□□□□□ -0.09
VMP1-217ENST00000593168 SHC3Q92529 594 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 HLA-CQ95604 372 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 OSBPL7Q9BZF2 842 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 C11orf16Q9NQ32 467 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 SPTLC3Q9NUV7 552 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 ARIH1Q9Y4X5 557 aaPredicted RBP14.46□□□□□ -0.09
VMP1-217ENST00000593168 HES2Q9Y543 173 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 ADGRG1Q9Y653 693 aa14.46□□□□□ -0.09
VMP1-217ENST00000593168 LCHNA4D1U4 455 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 EIF3CLB5ME19 914 aaKnown RBP14.45□□□□□ -0.1
VMP1-217ENST00000593168 RBAK-RBAKDNI3L0D1 243 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 FOXN3O00409 490 aaPredicted RBP14.45□□□□□ -0.1
VMP1-217ENST00000593168 XPOTO43592 962 aaKnown RBP14.45□□□□□ -0.1
VMP1-217ENST00000593168 NDUFA10O95299 355 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 LCA5LO95447 670 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 CCDC175P0C221 793 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 SKIP12755 728 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 TBXAS1P24557 533 aaPredicted RBP14.45□□□□□ -0.1
VMP1-217ENST00000593168 AKAP5P24588 427 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 ATICP31939 592 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 EIF4A3P38919 411 aaKnown RBP14.45□□□□□ -0.1
VMP1-217ENST00000593168 NOP14P78316 857 aaKnown RBP14.45□□□□□ -0.1
VMP1-217ENST00000593168 KLHL30Q0D2K2 578 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 ASTE1Q2TB18 679 aaPredicted RBP14.45□□□□□ -0.1
VMP1-217ENST00000593168 TMEM31Q5JXX7 168 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 TOGARAM2Q6ZUX3 1019 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 LRRC8DQ7L1W4 858 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 TMCO2Q7Z6W1 182 aaPredicted RBP14.45□□□□□ -0.1
VMP1-217ENST00000593168 FAM71AQ8IYT1 594 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 C1orf127Q8N9H9 656 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 CXorf38Q8TB03 319 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 KAT5Q92993 513 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 KIF12Q96FN5 646 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 EIF3CQ99613 913 aaKnown RBP14.45□□□□□ -0.1
VMP1-217ENST00000593168 XYLT2Q9H1B5 865 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 RNF39Q9H2S5 420 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 VRTNQ9H8Y1 702 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 APOBEC3GQ9HC16 384 aaKnown RBP14.45□□□□□ -0.1
VMP1-217ENST00000593168 DPP3Q9NY33 737 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 PARP2Q9UGN5 583 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 SIX4Q9UIU6 781 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 ITGA11Q9UKX5 1188 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 UBQLN1Q9UMX0 589 aaKnown RBP14.45□□□□□ -0.1
VMP1-217ENST00000593168 HCN4Q9Y3Q4 1203 aa14.45□□□□□ -0.1
VMP1-217ENST00000593168 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.45□□□□□ -0.1
VMP1-217ENST00000593168 RALGAPA2Q2PPJ7 1873 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 A0A0U1RQF3 1178 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 FAM86C2PA6NEL3 165 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 AKR1B10O60218 316 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 GFPT2O94808 682 aa14.44□□□□□ -0.1
VMP1-217ENST00000593168 PARNO95453 639 aaKnown RBP14.44□□□□□ -0.1
VMP1-217ENST00000593168 STAU1O95793 577 aaKnown RBP14.44□□□□□ -0.1
VMP1-217ENST00000593168 PLEKP08567 350 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms