RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 ARHGEF3Q9NR81 526 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 ADAM22Q9P0K1 906 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
ZNF540-210ENST00000592533 CD2APQ9Y5K6 639 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 VWA5AO00534 786 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 PRPF4O43172 522 aaKnown RBP eCLIP12.31□□□□□ -0.44
ZNF540-210ENST00000592533 LIASO43766 372 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 GH1P01241 217 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 PIK3CAP42336 1068 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 MCL1Q07820 350 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 TLDC1Q6P9B6 456 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 RCOR2Q8IZ40 523 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 ELMO3Q96BJ8 720 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 TGS1Q96RS0 853 aaKnown RBP12.31□□□□□ -0.44
ZNF540-210ENST00000592533 POLR3FQ9H1D9 316 aaPredicted RBP12.31□□□□□ -0.44
ZNF540-210ENST00000592533 PTPRJQ12913 1337 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 WNT10BO00744 389 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 NDC80O14777 642 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 STAM2O75886 525 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 RGS20O76081 388 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 NR3C2P08235 984 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 CLTAP09496 248 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 GCAP28676 217 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 OAZ1P54368 228 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 WNT7BP56706 349 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 LLGL2Q6P1M3 1020 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 ABHD15Q6UXT9 468 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 REPS2Q8NFH8 660 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 MGARPQ8TDB4 240 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 RBM41Q96IZ5 413 aaKnown RBP12.31□□□□□ -0.44
ZNF540-210ENST00000592533 ECT2Q9H8V3 914 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 APOBEC3GQ9HC16 384 aaKnown RBP12.31□□□□□ -0.44
ZNF540-210ENST00000592533 PARVAQ9NVD7 372 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 NKIRAS1Q9NYS0 192 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 IP6K2Q9UHH9 426 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 DRG1Q9Y295 367 aaKnown RBP12.31□□□□□ -0.44
ZNF540-210ENST00000592533 TCRBV5S1A1TA0A578 114 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 DNALI1O14645 258 aaPredicted RBP12.3□□□□□ -0.44
ZNF540-210ENST00000592533 TAC1P20366 129 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 GNA15P30679 374 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 MAGEA4P43358 317 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 LIG4P49917 911 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 PRKCEQ02156 737 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 MKRN4PQ13434 485 aaPredicted RBP12.3□□□□□ -0.44
ZNF540-210ENST00000592533 LLGL1Q15334 1064 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 EAPPQ56P03 285 aaPredicted RBP12.3□□□□□ -0.44
ZNF540-210ENST00000592533 FEZF2Q8TBJ5 459 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 BICD1Q96G01 975 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 CDHR1Q96JP9 859 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 CFAP57Q96MR6 1250 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 FNBP1Q96RU3 617 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 RBM15Q96T37 977 aaKnown RBP eCLIP12.3□□□□□ -0.44
ZNF540-210ENST00000592533 CGRRF1Q99675 332 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 C11orf70Q9BRQ4 267 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 PHACTR1Q9C0D0 580 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 CXorf56Q9H5V9 222 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 JPH1Q9HDC5 661 aaPredicted RBP12.3□□□□□ -0.44
ZNF540-210ENST00000592533 KCNK9Q9NPC2 374 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 FAM47DPA6NHR8 397 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 STX2P32856 288 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 HSPA1LP34931 641 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 NLRP11P59045 1033 aaKnown RBP12.3□□□□□ -0.44
ZNF540-210ENST00000592533 NFX1Q12986 1120 aaKnown RBP12.3□□□□□ -0.44
ZNF540-210ENST00000592533 SLFN12LQ6IEE8 588 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 TRABD2AQ86V40 505 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 CCDC60Q8IWA6 550 aaPredicted RBP12.3□□□□□ -0.44
ZNF540-210ENST00000592533 DENND1AQ8TEH3 1009 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 SLITRK1Q96PX8 696 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 HEMGNQ9BXL5 484 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 AGO2Q9UKV8 859 aaKnown RBP12.3□□□□□ -0.44
ZNF540-210ENST00000592533 ZNRF3Q9ULT6 936 aa12.3□□□□□ -0.44
ZNF540-210ENST00000592533 ANK1P16157 1881 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 ASMTLO95671 621 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 LDHAP00338 332 aaKnown RBP12.29□□□□□ -0.44
ZNF540-210ENST00000592533 CFHP08603 1231 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 MMP8P22894 467 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 CETN2P41208 172 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 BAATQ14032 418 aaPredicted RBP12.29□□□□□ -0.44
ZNF540-210ENST00000592533 XKR3Q5GH77 459 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 MIS18BP1Q6P0N0 1132 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 TBC1D1Q86TI0 1168 aaPredicted RBP12.29□□□□□ -0.44
ZNF540-210ENST00000592533 FITM2Q8N6M3 262 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 ALLCQ8N6M5 410 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 ANKRD42Q8N9B4 389 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 PWWP2AQ96N64 755 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 HAPLN2Q9GZV7 340 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 RPAP3Q9H6T3 665 aaPredicted RBP12.29□□□□□ -0.44
ZNF540-210ENST00000592533 RNF146Q9NTX7 359 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 SENP1Q9P0U3 644 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 STARD13Q9Y3M8 1113 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 ADGRA2Q96PE1 1338 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 TMEM191CA6NGB0 347 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 TLR3O15455 904 aaKnown RBP12.29□□□□□ -0.44
ZNF540-210ENST00000592533 LSM8O95777 96 aaKnown RBP12.29□□□□□ -0.44
ZNF540-210ENST00000592533 TMEM191BP0C7N4 346 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 KCNJ2P63252 427 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 IL9RQ01113 521 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 MORF4L2Q15014 288 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 P3H1Q32P28 736 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms