RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 SPTLC2O15270 562 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 TRAPPC3O43617 180 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 XRCC6P12956 609 aaKnown RBP eCLIP11.2□□□□□ -0.62
SDF2-209ENST00000591903 ATP2B1P20020 1258 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 YWHABP31946 246 aaKnown RBP11.2□□□□□ -0.62
SDF2-209ENST00000591903 KPNA1P52294 538 aaPredicted RBP11.2□□□□□ -0.62
SDF2-209ENST00000591903 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
SDF2-209ENST00000591903 ZNF252P-AS1Q0IIN9 211 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 FOXC1Q12948 553 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 STK38Q15208 465 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 HYIQ5T013 277 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 DAB2IPQ5VWQ8 1189 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 POTEHQ6S545 545 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 ELMOD1Q8N336 334 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 KRI1Q8N9T8 703 aaKnown RBP11.2□□□□□ -0.62
SDF2-209ENST00000591903 FAM200AQ8TCP9 573 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 CORO1BQ9BR76 489 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 PYM1Q9BRP8 204 aaKnown RBP11.2□□□□□ -0.62
SDF2-209ENST00000591903 POLR3CQ9BUI4 534 aaPredicted RBP11.2□□□□□ -0.62
SDF2-209ENST00000591903 GPR88Q9GZN0 384 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 TUFT1Q9NNX1 390 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 BMP2KQ9NSY1 1161 aaPredicted RBP11.2□□□□□ -0.62
SDF2-209ENST00000591903 CACNG4Q9UBN1 327 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 WASF3Q9UPY6 502 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 CLIC4Q9Y696 253 aa11.2□□□□□ -0.62
SDF2-209ENST00000591903 NUP210Q8TEM1 1887 aaPredicted RBP11.2□□□□□ -0.62
SDF2-209ENST00000591903 KIF26AQ9ULI4 1882 aaPredicted RBP11.2□□□□□ -0.62
SDF2-209ENST00000591903 ARNTLO00327 626 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 CHADO15335 359 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 CUTAO60888 179 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 CCDC192P0DO97 292 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 ATF2P15336 505 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 RPA1P27694 616 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 MPLP40238 635 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 TXKP42681 527 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 RING1Q06587 406 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 NBR1Q14596 966 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 CCDC6Q16204 474 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 XKR9Q5GH70 373 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 IQCEQ6IPM2 695 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 SLC8B1Q6J4K2 584 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 FAM173BQ6P4H8 233 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 RALGPS2Q86X27 583 aaPredicted RBP11.19□□□□□ -0.62
SDF2-209ENST00000591903 YAF2Q8IY57 180 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 TCEAL8Q8IYN2 117 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 LEO1Q8WVC0 666 aaPredicted RBP11.19□□□□□ -0.62
SDF2-209ENST00000591903 ZCCHC14Q8WYQ9 949 aaKnown RBP11.19□□□□□ -0.62
SDF2-209ENST00000591903 GATA6Q92908 595 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 ZC3H10Q96K80 434 aaKnown RBP11.19□□□□□ -0.62
SDF2-209ENST00000591903 SPATA32Q96LK8 384 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 PRIMPOLQ96LW4 560 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 HSD17B14Q9BPX1 270 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 LXNQ9BS40 222 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 EDEM2Q9BV94 578 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 CCSER1Q9C0I3 900 aa11.19□□□□□ -0.62
SDF2-209ENST00000591903 RBM12Q9NTZ6 932 aaKnown RBP11.19□□□□□ -0.62
SDF2-209ENST00000591903 FBXO2Q9UK22 296 aaPredicted RBP11.19□□□□□ -0.62
SDF2-209ENST00000591903 A0A1W2PQ27 194 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 A0A1W2PQ64 194 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 A0A1W2PQD8 194 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 MYBPHLA2RUH7 354 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 EML1O00423 815 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 PTGESO14684 152 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 ABLIM3O94929 683 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 CEACAM1P13688 526 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 TXLNAP40222 546 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 ROR1Q01973 937 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 CAPSQ13938 189 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 NAB2Q15742 525 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 KRT79Q5XKE5 535 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 ADALQ6DHV7 355 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 Q6ZS52 159 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 KBTBD6Q86V97 674 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 ZSCAN18Q8TBC5 510 aaPredicted RBP11.18□□□□□ -0.62
SDF2-209ENST00000591903 TCEAL4Q96EI5 215 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 DDX27Q96GQ7 796 aaKnown RBP11.18□□□□□ -0.62
SDF2-209ENST00000591903 UROC1Q96N76 676 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 GBP4Q96PP9 640 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 ZSWIM4Q9H7M6 989 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 WRAP73Q9P2S5 460 aaPredicted RBP11.18□□□□□ -0.62
SDF2-209ENST00000591903 LRWD1Q9UFC0 647 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 MAFFQ9ULX9 164 aa11.18□□□□□ -0.62
SDF2-209ENST00000591903 FAM237AA0A1B0GTK4 181 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 VWA3AA6NCI4 1184 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 HEPACAM2A8MVW5 462 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 SPECC1L-ADORA2AF8WAN1 911 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 N4BP3O15049 544 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 B4GALT5O43286 388 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 ATG13O75143 517 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 DGAT1O75907 488 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 B3GAT3O94766 335 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 CSRP1P21291 193 aaKnown RBP11.17□□□□□ -0.62
SDF2-209ENST00000591903 CTHP32929 405 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 VIPR2P41587 438 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 CCR2P41597 374 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 FCHO2Q0JRZ9 810 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 CCINQ13939 588 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 TPGS2Q68CL5 300 aa11.17□□□□□ -0.62
SDF2-209ENST00000591903 PPP4R3CPQ6ZMV5 832 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms