RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 RPUSD2Q8IZ73 545 aaKnown RBP13.9□□□□□ -0.18
PTBP1-216ENST00000590887 SMG8Q8ND04 991 aaKnown RBP13.9□□□□□ -0.18
PTBP1-216ENST00000590887 SEPT8Q92599 483 aa13.9□□□□□ -0.18
PTBP1-216ENST00000590887 SECISBP2LQ93073 1101 aaKnown RBP13.9□□□□□ -0.18
PTBP1-216ENST00000590887 WNT8BQ93098 351 aa13.9□□□□□ -0.18
PTBP1-216ENST00000590887 TRIM11Q96F44 468 aa13.9□□□□□ -0.18
PTBP1-216ENST00000590887 RGS18Q9NS28 235 aa13.9□□□□□ -0.18
PTBP1-216ENST00000590887 NXF1Q9UBU9 619 aaKnown RBP13.9□□□□□ -0.18
PTBP1-216ENST00000590887 AJAP1Q9UKB5 411 aaPredicted RBP13.9□□□□□ -0.18
PTBP1-216ENST00000590887 NUB1Q9Y5A7 615 aa13.9□□□□□ -0.18
PTBP1-216ENST00000590887 USP27XA6NNY8 438 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 RTN2O75298 545 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 KIF4AO95239 1232 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 MYCP01106 439 aaPredicted RBP13.89□□□□□ -0.19
PTBP1-216ENST00000590887 PAEPP09466 180 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 RPL9P32969 192 aaKnown RBP13.89□□□□□ -0.19
PTBP1-216ENST00000590887 GJA8P48165 433 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 CYP27A1Q02318 531 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 DSC3Q14574 896 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 TMEM270Q6UE05 265 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 SLC24A5Q71RS6 500 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 DPH6Q7L8W6 267 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 TRIM58Q8NG06 486 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 CTNNBL1Q8WYA6 563 aaPredicted RBP13.89□□□□□ -0.19
PTBP1-216ENST00000590887 ZNF592Q92610 1267 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
PTBP1-216ENST00000590887 UROC1Q96N76 676 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 NOX5Q96PH1 765 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 ADAM2Q99965 735 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 AGO3Q9H9G7 860 aaKnown RBP13.89□□□□□ -0.19
PTBP1-216ENST00000590887 APOBEC3GQ9HC16 384 aaKnown RBP13.89□□□□□ -0.19
PTBP1-216ENST00000590887 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.89□□□□□ -0.194e-7■■■■■ 111
PTBP1-216ENST00000590887 CISHQ9NSE2 258 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 KANSL3Q9P2N6 904 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 GUCA1BQ9UMX6 200 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 HES2Q9Y543 173 aa13.89□□□□□ -0.19
PTBP1-216ENST00000590887 TNRC18O15417 2968 aaPredicted RBP13.89□□□□□ -0.19
PTBP1-216ENST00000590887 KIAA0100Q14667 2235 aaKnown RBP13.88□□□□□ -0.19
PTBP1-216ENST00000590887 A0A087X0T9 212 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 ANKRD62A6NC57 917 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 HOXA2O43364 376 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 FAM228BP0C875 321 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 LRPAP1P30533 357 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 GNA15P30679 374 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 TAF6P49848 677 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 STILQ15468 1287 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 C9orf57Q5W0N0 161 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 SPOPLQ6IQ16 392 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 RBBP8NLQ8NC74 664 aaPredicted RBP13.88□□□□□ -0.19
PTBP1-216ENST00000590887 MSANTD4Q8NCY6 345 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 SLC30A5Q8TAD4 765 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 URGCPQ8TCY9 931 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 EPS8L1Q8TE68 723 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 KAT5Q92993 513 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 MMS19Q96T76 1030 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 BCO2Q9BYV7 579 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 XYLT2Q9H1B5 865 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 RSAD1Q9HA92 442 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 DNAI1Q9UI46 699 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 SIX4Q9UIU6 781 aa13.88□□□□□ -0.19
PTBP1-216ENST00000590887 PDCD11Q14690 1871 aaKnown RBP13.88□□□□□ -0.19
PTBP1-216ENST00000590887 TRIP11Q15643 1979 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 A0A0A6YYK5 440 aaPredicted RBP13.87□□□□□ -0.19
PTBP1-216ENST00000590887 CTAGE9A4FU28 777 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 DDX3XO00571 662 aaKnown RBP eCLIP13.87□□□□□ -0.195e-19■■■■□ 22.3
PTBP1-216ENST00000590887 PIRO00625 290 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 PQBP1O60828 265 aaKnown RBP13.87□□□□□ -0.19
PTBP1-216ENST00000590887 TMEM253P0C7T8 217 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 MYBL1P10243 752 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 ACO1P21399 889 aaKnown RBP13.87□□□□□ -0.19
PTBP1-216ENST00000590887 RFC2P35250 354 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 ZNF569Q5MCW4 686 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 SYT10Q6XYQ8 523 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 SLC47A2Q86VL8 602 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 UNC93AQ86WB7 457 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 GLYCTKQ8IVS8 523 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 RHOT2Q8IXI1 618 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 SYCE1Q8N0S2 351 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 ZNF518BQ9C0D4 1074 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 MIS12Q9H081 205 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 C11orf49Q9H6J7 331 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 ELAC1Q9H777 363 aaKnown RBP13.87□□□□□ -0.19
PTBP1-216ENST00000590887 KLK14Q9P0G3 267 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 PUF60Q9UHX1 559 aaKnown RBP13.87□□□□□ -0.19
PTBP1-216ENST00000590887 REXO2Q9Y3B8 237 aaKnown RBP13.87□□□□□ -0.19
PTBP1-216ENST00000590887 UMODL1Q5DID0 1318 aa13.87□□□□□ -0.19
PTBP1-216ENST00000590887 ANO9A1A5B4 782 aa13.86□□□□□ -0.19
PTBP1-216ENST00000590887 THAP12O43422 761 aa13.86□□□□□ -0.19
PTBP1-216ENST00000590887 HUS1O60921 280 aa13.86□□□□□ -0.19
PTBP1-216ENST00000590887 PNMA6AP0CW24 399 aaPredicted RBP13.86□□□□□ -0.19
PTBP1-216ENST00000590887 CD58P19256 250 aa13.86□□□□□ -0.19
PTBP1-216ENST00000590887 ASPAP45381 313 aa13.86□□□□□ -0.19
PTBP1-216ENST00000590887 NOP2P46087 812 aaKnown RBP13.86□□□□□ -0.19
PTBP1-216ENST00000590887 SNX16P57768 344 aa13.86□□□□□ -0.19
PTBP1-216ENST00000590887 GPC5P78333 572 aa13.86□□□□□ -0.19
PTBP1-216ENST00000590887 GRIK3Q13003 919 aa13.86□□□□□ -0.19
PTBP1-216ENST00000590887 GLB1LQ6UWU2 654 aa13.86□□□□□ -0.19
PTBP1-216ENST00000590887 NECAB2Q7Z6G3 386 aa13.86□□□□□ -0.19
PTBP1-216ENST00000590887 NOP9Q86U38 636 aaKnown RBP13.86□□□□□ -0.19
PTBP1-216ENST00000590887 ECHDC2Q86YB7 292 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms