RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 PLSCR1O15162 318 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 LIASO43766 372 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 HLA-DRAP01903 254 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 FOXN2P32314 431 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 MSH2P43246 934 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 WDR4P57081 412 aaKnown RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 TAS2R40P59535 323 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 LACTBP83111 547 aaPredicted RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 MGAT5Q09328 741 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 MORF4L2Q15014 288 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 EAPPQ56P03 285 aaPredicted RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 ECHDC2Q86YB7 292 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 SRRM1Q8IYB3 904 aaKnown RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 CPA5Q8WXQ8 436 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 MIEF2Q96C03 454 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 STAMBPL1Q96FJ0 436 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 RMDN2Q96LZ7 410 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 TAAR1Q96RJ0 339 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 RBM15Q96T37 977 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■■■■□ 23.6
PDE4A-207ENST00000590407 GLIS2Q9BZE0 524 aaPredicted RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 KIAA1683Q9H0B3 1180 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 LRMDAQ9H2I8 198 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 IP6K2Q9UHH9 426 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 SLC24A2Q9UI40 661 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 RPL26L1Q9UNX3 145 aaKnown RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 CLRN2A0PK11 232 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 RASA4BC9J798 803 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 HNRNPDLO14979 420 aaKnown RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 RASA4O43374 803 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 ATP9AO75110 1047 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 ANP32DO95626 131 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 KRT16P08779 473 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 TBXAS1P24557 533 aaPredicted RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 GCAP28676 217 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 POLGP54098 1239 aaPredicted RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 RPS6P62753 249 aaKnown RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 NFX1Q12986 1120 aaKnown RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 CUL2Q13617 745 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 MOGSQ13724 837 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 SPARCL1Q14515 664 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 TRIP13Q15645 432 aaPredicted RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 ZYXQ15942 572 aaKnown RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 MEX3CQ5U5Q3 659 aaKnown RBP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 TAS1R3Q7RTX0 852 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 KRT27Q7Z3Y8 459 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 AGGF1Q8N302 714 aaeCLIP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 ALLCQ8N6M5 410 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 ANKLE1Q8NAG6 615 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 CFAP61Q8NHU2 1237 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 GDAP1Q8TB36 358 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 FEZF2Q8TBJ5 459 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 INPP5DQ92835 1189 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 PITPNM3Q9BZ71 974 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 MAF1Q9H063 256 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.12□□□□□ -0.31
PDE4A-207ENST00000590407 PARVAQ9NVD7 372 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 ADAM22Q9P0K1 906 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 SHOC2Q9UQ13 582 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 USH1CQ9Y6N9 552 aa13.12□□□□□ -0.31
PDE4A-207ENST00000590407 WDR81Q562E7 1941 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 ALOX15BO15296 676 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 ZBED4O75132 1171 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 TJP3O95049 919 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 GBP2P32456 591 aaPredicted RBP13.11□□□□□ -0.31
PDE4A-207ENST00000590407 DSG3P32926 999 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 PDK4Q16654 411 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 ACCSLQ4AC99 568 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 NLRX1Q86UT6 975 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 ZNF398Q8TD17 642 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 NSMCE1Q8WV22 266 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 NKD2Q969F2 451 aaPredicted RBP13.11□□□□□ -0.31
PDE4A-207ENST00000590407 CEP170P1Q96L14 293 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 FAM213AQ9BRX8 229 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 PI4K2AQ9BTU6 479 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 FRMD8P1Q9BZ68 369 aaPredicted RBP13.11□□□□□ -0.31
PDE4A-207ENST00000590407 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
PDE4A-207ENST00000590407 EXOC1LA0A1B0GW35 172 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 E7ENQ6 273 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 TRAFD1O14545 582 aaPredicted RBP13.1□□□□□ -0.31
PDE4A-207ENST00000590407 LIN7AO14910 233 aaPredicted RBP13.1□□□□□ -0.31
PDE4A-207ENST00000590407 ZNF862O60290 1169 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 DCTN3O75935 186 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 EIF2AK2P19525 551 aaKnown RBP13.1□□□□□ -0.31
PDE4A-207ENST00000590407 CCND2P30279 289 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 PIK3CAP42336 1068 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 ZNF132P52740 706 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 CLNS1AP54105 237 aaKnown RBP13.1□□□□□ -0.31
PDE4A-207ENST00000590407 ATP11AP98196 1134 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 TAP1Q03518 808 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 MYO1EQ12965 1108 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
PDE4A-207ENST00000590407 SETDB1Q15047 1291 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 ZKSCAN8Q15776 578 aaPredicted RBP13.1□□□□□ -0.31
PDE4A-207ENST00000590407 P3H1Q32P28 736 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 TDRD10Q5VZ19 366 aaKnown RBP13.1□□□□□ -0.31
PDE4A-207ENST00000590407 MIS18BP1Q6P0N0 1132 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 VSIG10LQ86VR7 867 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 TBC1D31Q96DN5 1066 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms