RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 M0QZQ0 153 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 SPTLC1O15269 473 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 TRAPPC3O43617 180 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 TADA2AO75478 443 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 FGF18O76093 207 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 PIK3CAP42336 1068 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 CETN1Q12798 172 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 MYO1EQ12965 1108 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 LIMS2Q7Z4I7 341 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 SPRED2Q7Z698 418 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 DDX53Q86TM3 631 aaKnown RBP12.97□□□□□ -0.33
APOC1-206ENST00000590334 KLHL23Q8NBE8 558 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 TMEM169Q96HH4 297 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 SUSD3Q96L08 255 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 C11orf84Q9BUA3 381 aaPredicted RBP12.97□□□□□ -0.33
APOC1-206ENST00000590334 VN1R3Q9BXE9 311 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 R3HCC1Q9Y3T6 440 aaKnown RBP12.97□□□□□ -0.33
APOC1-206ENST00000590334 A0A1B0GTH6 734 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 H3BNC9 293 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 FANCCQ00597 558 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 KRT17Q04695 432 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 UBE3AQ05086 875 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 ELAVL2Q12926 359 aaKnown RBP12.96□□□□□ -0.33
APOC1-206ENST00000590334 ZNF699Q32M78 642 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 TIGD5Q53EQ6 642 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 FUT10Q6P4F1 479 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 GBP6Q6ZN66 633 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 EHBP1Q8NDI1 1231 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 FBXO22Q8NEZ5 403 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 HASPINQ8TF76 798 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 GPR62Q9BZJ7 368 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 RTN4Q9NQC3 1192 aaKnown RBP12.96□□□□□ -0.33
APOC1-206ENST00000590334 CHST7Q9NS84 486 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 NUB1Q9Y5A7 615 aa12.96□□□□□ -0.33
APOC1-206ENST00000590334 ARHGEF37A1IGU5 675 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 SOX1O00570 391 aaPredicted RBP12.95□□□□□ -0.34
APOC1-206ENST00000590334 LRRN2O75325 713 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 SERPINC1P01008 464 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 SOD2P04179 222 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 CYP11A1P05108 521 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 FAM163BP0C2L3 166 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 FGFR3P22607 806 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 BRCC3P46736 316 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 NOP14P78316 857 aaKnown RBP12.95□□□□□ -0.34
APOC1-206ENST00000590334 KCNMA1Q12791 1236 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 NR1I3Q14994 352 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 EXOC3L4Q17RC7 722 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 UVSSAQ2YD98 709 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 WDR72Q3MJ13 1102 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 FILIP1LQ4L180 1135 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 DPY19L2P1Q6NXN4 242 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 TRIM65Q6PJ69 517 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 SARM1Q6SZW1 724 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.95□□□□□ -0.34
APOC1-206ENST00000590334 DPH6Q7L8W6 267 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 SPPL3Q8TCT6 385 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 SENP8Q96LD8 212 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 NAP1L5Q96NT1 182 aaPredicted RBP12.95□□□□□ -0.34
APOC1-206ENST00000590334 ERGIC2Q96RQ1 377 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 PI4K2AQ9BTU6 479 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 HERC2P3Q9BVR0 1158 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 IMPG2Q9BZV3 1241 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 APOBEC3GQ9HC16 384 aaKnown RBP12.95□□□□□ -0.34
APOC1-206ENST00000590334 GCNT4Q9P109 453 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 PCDHB8Q9UN66 801 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 CDH23Q9H251 3354 aa12.95□□□□□ -0.34
APOC1-206ENST00000590334 PLXNA3P51805 1871 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 CYB561D2O14569 222 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 SYN3O14994 580 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 ODC1P11926 461 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 P4HA1P13674 534 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 SLC9A1P19634 815 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 TYMPP19971 482 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 PON1P27169 355 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 SOWAHAQ2M3V2 549 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 USP41Q3LFD5 358 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 ZNF667Q5HYK9 610 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 WDR44Q5JSH3 913 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 FKBP15Q5T1M5 1219 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 SMYD5Q6GMV2 418 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 SPOPLQ6IQ16 392 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 DSTYKQ6XUX3 929 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 TAS1R1Q7RTX1 841 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 TOP6BLQ8N6T0 577 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 CCDC150Q8NCX0 1101 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 SPATA18Q8TC71 538 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 BCO2Q9BYV7 579 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 INTS2Q9H0H0 1204 aaKnown RBP12.94□□□□□ -0.34
APOC1-206ENST00000590334 LMAN2LQ9H0V9 348 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 FAM124BQ9H5Z6 455 aaPredicted RBP12.94□□□□□ -0.34
APOC1-206ENST00000590334 ZNF576Q9H609 170 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 PLCB1Q9NQ66 1216 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 PUF60Q9UHX1 559 aaKnown RBP12.94□□□□□ -0.34
APOC1-206ENST00000590334 DSEQ9UL01 958 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 MTUS1Q9ULD2 1270 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 SIK3Q9Y2K2 1263 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 SNX9Q9Y5X1 595 aa12.94□□□□□ -0.34
APOC1-206ENST00000590334 MTCL1Q9Y4B5 1905 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms