RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ASAH2Q9NR71 780 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 WASF3Q9UPY6 502 aa14.03□□□□□ -0.16
PRKCSH-210ENST00000589990 FOXD2O60548 495 aaPredicted RBP14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 RPP40O75818 363 aaKnown RBP14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 OR4Q2P0C623 313 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 HOXA6P31267 233 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 MPLP40238 635 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 MLLT6P55198 1093 aaPredicted RBP14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 SCRN1Q12765 414 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 FOXC1Q12948 553 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 CALCRLQ16602 461 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 DCAF4L1Q3SXM0 396 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 ATF7IP2Q5U623 682 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 ALKAL1Q6UXT8 129 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 RUFY3Q7L099 469 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 CENPQQ7L2Z9 268 aaPredicted RBP14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 CATSPER3Q86XQ3 398 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 ARID3BQ8IVW6 561 aaPredicted RBP14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 YAF2Q8IY57 180 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 CHFRQ96EP1 664 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 PGLYRP2Q96PD5 576 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 C2orf40Q9H1Z8 148 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 C8orf33Q9H7E9 229 aaPredicted RBP14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 ZSWIM6Q9HCJ5 1215 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 YIPF1Q9Y548 306 aa14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 GCN1Q92616 2671 aaKnown RBP14.02□□□□□ -0.17
PRKCSH-210ENST00000589990 SYN3O14994 580 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 PRAMEF12O95522 483 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 NOVA1P51513 510 aaKnown RBP14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 CDR1P51861 262 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 CACNB1Q02641 598 aaPredicted RBP14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 ACAP1Q15027 740 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 XKR4Q5GH76 650 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 DGKKQ5KSL6 1271 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 TPGS2Q68CL5 300 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 RNF43Q68DV7 783 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 PADI6Q6TGC4 694 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 CACNA2D4Q7Z3S7 1137 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 FAM177A1Q8N128 213 aaPredicted RBP14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 ELMOD1Q8N336 334 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 KDF1Q8NAX2 398 aaPredicted RBP14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 MCPH1Q8NEM0 835 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 DEPTORQ8TB45 409 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 ZNF274Q96GC6 653 aaPredicted RBP14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 MTMR9Q96QG7 549 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 CDT1Q9H211 546 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 TMEM60Q9H2L4 133 aa14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 AFF4Q9UHB7 1163 aaKnown RBP14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 TIMM13Q9Y5L4 95 aaPredicted RBP14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 NUP210Q8TEM1 1887 aaPredicted RBP14.01□□□□□ -0.17
PRKCSH-210ENST00000589990 C4orf47A7E2U8 309 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 DCLK1O15075 740 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 SOAT2O75908 522 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 CTDNEP1O95476 244 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 CPB1P15086 417 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 PSMA5P28066 241 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 NAMPTP43490 491 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 NAIF1Q69YI7 327 aaPredicted RBP14□□□□□ -0.17
PRKCSH-210ENST00000589990 GAREM2Q75VX8 874 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 RALGPS2Q86X27 583 aaPredicted RBP14□□□□□ -0.17
PRKCSH-210ENST00000589990 TTC9BQ8N6N2 239 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 DDX12PQ92771 950 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 MSANTD3Q96H12 275 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 LOXL4Q96JB6 756 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 NAP1L4Q99733 375 aaKnown RBP14□□□□□ -0.17
PRKCSH-210ENST00000589990 SMG9Q9H0W8 520 aaKnown RBP14□□□□□ -0.17
PRKCSH-210ENST00000589990 LAMA5O15230 3695 aa14□□□□□ -0.17
PRKCSH-210ENST00000589990 CITO14578 2027 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 OTOL1A6NHN0 477 aaPredicted RBP13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 H7C4K7 107 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 CCDC192P0DO97 292 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 XRCC6P12956 609 aaKnown RBP eCLIP13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 CYP11B2P19099 503 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 GRM5P41594 1212 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 ZNF252P-AS1Q0IIN9 211 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 PLK5Q496M5 336 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 FSTL4Q6MZW2 842 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 ZNF280DQ6N043 979 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 BEST2Q8NFU1 509 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 FAM200AQ8TCP9 573 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 SUSD3Q96L08 255 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 TBC1D32Q96NH3 1257 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 HHIPQ96QV1 700 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 EDEM2Q9BV94 578 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 PTPRHQ9HD43 1115 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 TUBGCP4Q9UGJ1 667 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 SLC27A5Q9Y2P5 690 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 NUB1Q9Y5A7 615 aa13.99□□□□□ -0.17
PRKCSH-210ENST00000589990 FREM2Q5SZK8 3169 aa13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 SRRM3A6NNA2 597 aaPredicted RBP13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 NEMFO60524 1076 aa13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 FDPSP14324 419 aaKnown RBP13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 MCM4P33991 863 aa13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 FOSBP53539 338 aa13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 DUSP4Q13115 394 aa13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 ECM1Q16610 540 aa13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 SEZ6Q53EL9 994 aa13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 CPLX2Q6PUV4 134 aaKnown RBP13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 TAS1R3Q7RTX0 852 aa13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 LEMD2Q8NC56 503 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms