RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 RASSF3Q86WH2 238 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 ARID3BQ8IVW6 561 aaPredicted RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 FRMD1Q8N878 549 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 RNF149Q8NC42 400 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 RPLP0P6Q8NHW5 317 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 PSPC1Q8WXF1 523 aaKnown RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 SLC5A5Q92911 643 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 FNBP1Q96RU3 617 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 POLR3CQ9BUI4 534 aaPredicted RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 NUSAP1Q9BXS6 441 aaKnown RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 SLITRK6Q9H5Y7 841 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 DHX33Q9H6R0 707 aaKnown RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 CYP4F11Q9HBI6 524 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 HPS4Q9NQG7 708 aa6.75□□□□□ -1.33
VPS25-204ENST00000589577 BMP2KQ9NSY1 1161 aaPredicted RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 WRAP73Q9P2S5 460 aaPredicted RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 UTP20O75691 2785 aaKnown RBP6.75□□□□□ -1.33
VPS25-204ENST00000589577 NBPF19A0A087WUL8 3843 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 DDX11L8A8MPP1 907 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 SH2B2O14492 632 aaPredicted RBP6.74□□□□□ -1.33
VPS25-204ENST00000589577 TNFRSF10BO14763 440 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 SH3BP5O60239 455 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 GAS7O60861 476 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 GJB3O75712 270 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 PSMD10O75832 226 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 VNN2O95498 520 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 NPTXRO95502 500 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 U2AF2P26368 475 aaKnown RBP eCLIP6.74□□□□□ -1.334e-8■□□□□ 9.6
VPS25-204ENST00000589577 BRCC3P46736 316 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 PTENP60484 403 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 PTH1RQ03431 593 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 CFHR1Q03591 330 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 TWF1Q12792 350 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 GRSF1Q12849 480 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS25-204ENST00000589577 TOGARAM2Q6ZUX3 1019 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 ANKS3Q6ZW76 656 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 ARMCX6Q7L4S7 300 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 RALYLQ86SE5 291 aaKnown RBP6.74□□□□□ -1.33
VPS25-204ENST00000589577 FERMT3Q86UX7 667 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 IFNLR1Q8IU57 520 aaPredicted RBP6.74□□□□□ -1.33
VPS25-204ENST00000589577 SYT12Q8IV01 421 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 MINDY1Q8N5J2 469 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 MDGA1Q8NFP4 955 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 NCOA7Q8NI08 942 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 OLIG1Q8TAK6 271 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 RIT2Q99578 217 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 GTPBP2Q9BX10 602 aaKnown RBP6.74□□□□□ -1.33
VPS25-204ENST00000589577 DNAJC25Q9H1X3 360 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 CAPN10Q9HC96 672 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 POLMQ9NP87 494 aaPredicted RBP6.74□□□□□ -1.33
VPS25-204ENST00000589577 ASAH2Q9NR71 780 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 TOR4AQ9NXH8 423 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 BARHL2Q9NY43 387 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 PARP2Q9UGN5 583 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 PILRBQ9UKJ0 227 aa6.74□□□□□ -1.33
VPS25-204ENST00000589577 ANK1P16157 1881 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 NID2Q14112 1375 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 A0A1B0GUA9 196 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 TRABD2BA6NFA1 517 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 TTLL13PA6NNM8 815 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 OPHN1O60890 802 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 CBFA2T3O75081 653 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 DKK1O94907 266 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 HNRNPLP14866 589 aaKnown RBP eCLIP6.73□□□□□ -1.33
VPS25-204ENST00000589577 ITPKAP23677 461 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 ELF1P32519 619 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 CLCNKBP51801 687 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 HNRNPDQ14103 355 aaKnown RBP6.73□□□□□ -1.33
VPS25-204ENST00000589577 KRT32Q14532 448 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 PCBP1Q15365 356 aaKnown RBP eCLIP6.73□□□□□ -1.33
VPS25-204ENST00000589577 USP39Q53GS9 565 aaKnown RBP6.73□□□□□ -1.33
VPS25-204ENST00000589577 LRCH2Q5VUJ6 765 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 TRIM68Q6AZZ1 485 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 IQCEQ6IPM2 695 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 ANO7Q6IWH7 933 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 SLC27A1Q6PCB7 646 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 GAREM2Q75VX8 874 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 TMPRSS7Q7RTY8 843 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 MIER3Q7Z3K6 550 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 C11orf74Q86VG3 221 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 TMEFF1Q8IYR6 380 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 HDDC3Q8N4P3 179 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 FANCBQ8NB91 859 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 LEMD2Q8NC56 503 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 RDM1Q8NG50 284 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 RIN3Q8TB24 985 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 BPIFB1Q8TDL5 484 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 RLN3Q8WXF3 142 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 SLC7A3Q8WY07 619 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 CNOT6LQ96LI5 555 aaKnown RBP6.73□□□□□ -1.33
VPS25-204ENST00000589577 ZNF512Q96ME7 567 aaPredicted RBP6.73□□□□□ -1.33
VPS25-204ENST00000589577 FCRL3Q96P31 734 aaPredicted RBP6.73□□□□□ -1.33
VPS25-204ENST00000589577 DCBLD2Q96PD2 775 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 FAM83CQ9BQN1 747 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 JPH2Q9BR39 696 aaPredicted RBP6.73□□□□□ -1.33
VPS25-204ENST00000589577 TEKT3Q9BXF9 490 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 TRIM6Q9C030 488 aaPredicted RBP6.73□□□□□ -1.33
VPS25-204ENST00000589577 GPR88Q9GZN0 384 aa6.73□□□□□ -1.33
VPS25-204ENST00000589577 SMG9Q9H0W8 520 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms