RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 PTGDRQ13258 359 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 PLD1Q13393 1074 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 CSRP2Q16527 193 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 IL31Q6EBC2 164 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 MPZL3Q6UWV2 235 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 RNF19BQ6ZMZ0 732 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 LONP2Q86WA8 852 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 DDX1Q92499 740 aaKnown RBP16.64■□□□□ 0.25
ACTN4-211ENST00000589528 DRC1Q96MC2 740 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 TARS2Q9BW92 718 aaKnown RBP16.64■□□□□ 0.25
ACTN4-211ENST00000589528 TMEM134Q9H6X4 195 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 RBM12Q9NTZ6 932 aaKnown RBP16.64■□□□□ 0.25
ACTN4-211ENST00000589528 DDX19AQ9NUU7 478 aaKnown RBP16.64■□□□□ 0.25
ACTN4-211ENST00000589528 LRWD1Q9UFC0 647 aa16.64■□□□□ 0.25
ACTN4-211ENST00000589528 NUP210Q8TEM1 1887 aaPredicted RBP16.63■□□□□ 0.25
ACTN4-211ENST00000589528 KIF26AQ9ULI4 1882 aaPredicted RBP16.63■□□□□ 0.25
ACTN4-211ENST00000589528 A0A1W2PRU2 124 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 CHADO15335 359 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 HIP1RO75146 1068 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 MATR3P43243 847 aaKnown RBP eCLIP16.63■□□□□ 0.253e-7■□□□□ 8.1
ACTN4-211ENST00000589528 EPHB3P54753 998 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 EPHA5P54756 1037 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 YWHAHQ04917 246 aaPredicted RBP16.63■□□□□ 0.25
ACTN4-211ENST00000589528 STRN3Q13033 797 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 SRSF5Q13243 272 aaKnown RBP16.63■□□□□ 0.25
ACTN4-211ENST00000589528 HAUS6Q7Z4H7 955 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 SHKBP1Q8TBC3 707 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 SNX29Q8TEQ0 813 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 RAB34Q9BZG1 259 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 PTPRHQ9HD43 1115 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 ANKFY1Q9P2R3 1169 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 PCDHB8Q9UN66 801 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 RBM19Q9Y4C8 960 aaKnown RBP16.63■□□□□ 0.25
ACTN4-211ENST00000589528 YIPF1Q9Y548 306 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 STK24Q9Y6E0 443 aa16.63■□□□□ 0.25
ACTN4-211ENST00000589528 CNOT1A5YKK6 2376 aaKnown RBP16.63■□□□□ 0.25
ACTN4-211ENST00000589528 ZNF638Q14966 1978 aaKnown RBP16.62■□□□□ 0.25
ACTN4-211ENST00000589528 ATG2BQ96BY7 2078 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 HRO43593 1189 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 MOSPD3O75425 235 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 ALDH1A3P47895 512 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 SOX9P48436 509 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 MLLT6P55198 1093 aaPredicted RBP16.62■□□□□ 0.25
ACTN4-211ENST00000589528 DMWDQ09019 674 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 NOLC1Q14978 699 aaKnown RBP eCLIP16.62■□□□□ 0.25
ACTN4-211ENST00000589528 ECM1Q16610 540 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 AASDHQ4L235 1098 aaPredicted RBP16.62■□□□□ 0.25
ACTN4-211ENST00000589528 DGKKQ5KSL6 1271 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 TTC38Q5R3I4 469 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 USP37Q86T82 979 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 C8orf76Q96K31 380 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 PGLYRP2Q96PD5 576 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 OXCT2Q9BYC2 517 aaPredicted RBP16.62■□□□□ 0.25
ACTN4-211ENST00000589528 DNM3Q9UQ16 869 aa16.62■□□□□ 0.25
ACTN4-211ENST00000589528 SPECC1L-ADORA2AF8WAN1 911 aa16.61■□□□□ 0.25
ACTN4-211ENST00000589528 GDF9O60383 454 aa16.61■□□□□ 0.25
ACTN4-211ENST00000589528 FXR2P51116 673 aaKnown RBP eCLIP16.61■□□□□ 0.254e-7■■■□□ 18.1
ACTN4-211ENST00000589528 GAS6Q14393 721 aa16.61■□□□□ 0.25
ACTN4-211ENST00000589528 ARHGAP15Q53QZ3 475 aa16.61■□□□□ 0.25
ACTN4-211ENST00000589528 Q6ZS52 159 aa16.61■□□□□ 0.25
ACTN4-211ENST00000589528 RALGPS2Q86X27 583 aaPredicted RBP16.61■□□□□ 0.25
ACTN4-211ENST00000589528 C12orf50Q8NA57 414 aaPredicted RBP16.61■□□□□ 0.25
ACTN4-211ENST00000589528 TTC8Q8TAM2 541 aa16.61■□□□□ 0.25
ACTN4-211ENST00000589528 ARHGAP28Q9P2N2 729 aa16.61■□□□□ 0.25
ACTN4-211ENST00000589528 NOL7Q9UMY1 257 aaKnown RBP16.61■□□□□ 0.25
ACTN4-211ENST00000589528 NCANO14594 1321 aa16.61■□□□□ 0.25
ACTN4-211ENST00000589528 ARNTLO00327 626 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 SLC16A4O15374 487 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 PAPSS2O95340 614 aaPredicted RBP16.6■□□□□ 0.25
ACTN4-211ENST00000589528 PROZP22891 400 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 CTHP32929 405 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 PON2Q15165 354 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 ARHGAP29Q52LW3 1261 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 KRT79Q5XKE5 535 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 DSTYKQ6XUX3 929 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 TAS1R3Q7RTX0 852 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 GPIHBP1Q8IV16 184 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 ARID3BQ8IVW6 561 aaPredicted RBP16.6■□□□□ 0.25
ACTN4-211ENST00000589528 FAM160A2Q8N612 972 aaPredicted RBP16.6■□□□□ 0.25
ACTN4-211ENST00000589528 KIF12Q96FN5 646 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 FOXP1Q9H334 677 aaPredicted RBP16.6■□□□□ 0.25
ACTN4-211ENST00000589528 C17orf75Q9HAS0 396 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 TUBGCP4Q9UGJ1 667 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 TIMM13Q9Y5L4 95 aaPredicted RBP16.6■□□□□ 0.25
ACTN4-211ENST00000589528 CHD8Q9HCK8 2581 aa16.6■□□□□ 0.25
ACTN4-211ENST00000589528 ANK1P16157 1881 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 MYBPHLA2RUH7 354 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 OR6C75A6NL08 312 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 E9PMD0 336 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 K7ESF4 209 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 TOM1L1O75674 476 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 FGF19O95750 216 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 OR4Q2P0C623 313 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 NEK4P51957 841 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 SMTNP53814 917 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 FCHO2Q0JRZ9 810 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 DUSP4Q13115 394 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 PDIA5Q14554 519 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 SEZ6Q53EL9 994 aa16.59■□□□□ 0.25
ACTN4-211ENST00000589528 ZBTB45Q96K62 511 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms