RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 TMEM130Q8N3G9 435 aa19■□□□□ 0.63
H3F3B-207ENST00000589417 BORCS6Q96GS4 357 aa19■□□□□ 0.63
H3F3B-207ENST00000589417 PDE11AQ9HCR9 933 aa19■□□□□ 0.63
H3F3B-207ENST00000589417 MAFFQ9ULX9 164 aa19■□□□□ 0.63
H3F3B-207ENST00000589417 PDCD11Q14690 1871 aaKnown RBP19■□□□□ 0.63
H3F3B-207ENST00000589417 TCF20Q9UGU0 1960 aaKnown RBP18.99■□□□□ 0.63
H3F3B-207ENST00000589417 ARHGEF37A1IGU5 675 aa18.99■□□□□ 0.63
H3F3B-207ENST00000589417 SPTLC1O15269 473 aa18.99■□□□□ 0.63
H3F3B-207ENST00000589417 ZMYND10O75800 440 aa18.99■□□□□ 0.63
H3F3B-207ENST00000589417 CYP11A1P05108 521 aa18.99■□□□□ 0.63
H3F3B-207ENST00000589417 PNPLA4P41247 253 aa18.99■□□□□ 0.63
H3F3B-207ENST00000589417 SNRNP35Q16560 246 aaKnown RBP18.99■□□□□ 0.63
H3F3B-207ENST00000589417 NFIL3Q16649 462 aa18.99■□□□□ 0.63
H3F3B-207ENST00000589417 ZNF461Q8TAF7 563 aa18.99■□□□□ 0.63
H3F3B-207ENST00000589417 ZNF707Q96C28 371 aaPredicted RBP18.99■□□□□ 0.63
H3F3B-207ENST00000589417 MFSD14AQ96MC6 490 aa18.99■□□□□ 0.63
H3F3B-207ENST00000589417 FBXL5Q9UKA1 691 aa18.99■□□□□ 0.63
H3F3B-207ENST00000589417 TRAF3IP3Q9Y228 551 aa18.99■□□□□ 0.63
H3F3B-207ENST00000589417 CDY1Q9Y6F8 540 aa18.99■□□□□ 0.63
H3F3B-207ENST00000589417 C5orf42Q9H799 3197 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 CCDC195A0A1B0GUA6 201 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 CLIC2O15247 247 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 HNRNPA1P09651 372 aaKnown RBP eCLIP18.98■□□□□ 0.63
H3F3B-207ENST00000589417 TAF6P49848 677 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 PSMD6Q15008 389 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 TPGS2Q68CL5 300 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 ZNF280DQ6N043 979 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 TMC5Q6UXY8 1006 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 GUF1Q8N442 669 aaKnown RBP18.98■□□□□ 0.63
H3F3B-207ENST00000589417 LRRC52Q8N7C0 313 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 C1orf127Q8N9H9 656 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 SENP8Q96LD8 212 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 GSDMAQ96QA5 445 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 APOL5Q9BWW9 433 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 PRKD2Q9BZL6 878 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 POMKQ9H5K3 350 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 INTS13Q9NVM9 706 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 ITGA11Q9UKX5 1188 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 USTQ9Y2C2 406 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 VWA8A3KMH1 1905 aa18.98■□□□□ 0.63
H3F3B-207ENST00000589417 PRPF40AO75400 957 aaKnown RBP18.97■□□□□ 0.63
H3F3B-207ENST00000589417 SPATA31D3P0C874 917 aa18.97■□□□□ 0.63
H3F3B-207ENST00000589417 ATF2P15336 505 aa18.97■□□□□ 0.63
H3F3B-207ENST00000589417 TFAMQ00059 246 aaKnown RBP18.97■□□□□ 0.63
H3F3B-207ENST00000589417 ROR1Q01973 937 aa18.97■□□□□ 0.63
H3F3B-207ENST00000589417 YWHAHQ04917 246 aaPredicted RBP18.97■□□□□ 0.63
H3F3B-207ENST00000589417 DUOXA2Q1HG44 320 aa18.97■□□□□ 0.63
H3F3B-207ENST00000589417 COBLL1Q53SF7 1204 aa18.97■□□□□ 0.63
H3F3B-207ENST00000589417 DSTYKQ6XUX3 929 aa18.97■□□□□ 0.63
H3F3B-207ENST00000589417 SPATA31D4Q6ZUB0 917 aa18.97■□□□□ 0.63
H3F3B-207ENST00000589417 WDR49Q8IV35 697 aa18.97■□□□□ 0.63
H3F3B-207ENST00000589417 GLYCTKQ8IVS8 523 aa18.97■□□□□ 0.63
H3F3B-207ENST00000589417 GTPBP4Q9BZE4 634 aaKnown RBP18.97■□□□□ 0.63
H3F3B-207ENST00000589417 DSEQ9UL01 958 aa18.97■□□□□ 0.63
H3F3B-207ENST00000589417 OR6C75A6NL08 312 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 RFPL2O75678 378 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 ODC1P11926 461 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 MCCD1P59942 119 aaPredicted RBP18.96■□□□□ 0.63
H3F3B-207ENST00000589417 CLDN10P78369 228 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 RBP5P82980 135 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 CYP24A1Q07973 514 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 CTXN3Q4LDR2 81 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 CLEC17AQ6ZS10 378 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 TCEAL8Q8IYN2 117 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 ZNF560Q96MR9 790 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 GZF1Q9H116 711 aaPredicted RBP18.96■□□□□ 0.63
H3F3B-207ENST00000589417 WDR6Q9NNW5 1121 aaKnown RBP18.96■□□□□ 0.63
H3F3B-207ENST00000589417 RMND1Q9NWS8 449 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 GDAP2Q9NXN4 497 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 SIX4Q9UIU6 781 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 CDH22Q9UJ99 828 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 HOOK1Q9UJC3 728 aaKnown RBP18.96■□□□□ 0.63
H3F3B-207ENST00000589417 NR2E1Q9Y466 385 aa18.96■□□□□ 0.63
H3F3B-207ENST00000589417 WDR27A2RRH5 827 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 KPNA7A9QM74 516 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 PI4K2BG5E9Z4 385 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 MAPK13O15264 365 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 EXOC3O60645 756 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 SSTR3P32745 418 aaPredicted RBP18.95■□□□□ 0.62
H3F3B-207ENST00000589417 CYP2J2P51589 502 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 PNOCQ13519 176 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 SV2CQ496J9 727 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 LIN9Q5TKA1 542 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 CCDC149Q6ZUS6 474 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 USP37Q86T82 979 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 CSGALNACT2Q8N6G5 542 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 OR5B17Q8NGF7 314 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 FEZF2Q8TBJ5 459 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 SPATA18Q8TC71 538 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 ANKRD36BP1Q96IX9 119 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 AFF4Q9UHB7 1163 aaKnown RBP18.95■□□□□ 0.62
H3F3B-207ENST00000589417 PCDHA5Q9Y5H7 936 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 PTPRJQ12913 1337 aa18.95■□□□□ 0.62
H3F3B-207ENST00000589417 SPDYE4A6NLX3 237 aa18.94■□□□□ 0.62
H3F3B-207ENST00000589417 GADD45BO75293 160 aaPredicted RBP18.94■□□□□ 0.62
H3F3B-207ENST00000589417 SMC2O95347 1197 aa18.94■□□□□ 0.62
H3F3B-207ENST00000589417 ITGB3P05106 788 aa18.94■□□□□ 0.62
H3F3B-207ENST00000589417 C8AP07357 584 aa18.94■□□□□ 0.62
H3F3B-207ENST00000589417 WEE2P0C1S8 567 aa18.94■□□□□ 0.62
H3F3B-207ENST00000589417 TMEM191BP0C7N4 346 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms