RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 XKR4Q5GH76 650 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 FAM26DQ5JW98 314 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 TMEM270Q6UE05 265 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 ALKAL1Q6UXT8 129 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 HACE1Q8IYU2 909 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 SLC43A3Q8NBI5 491 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 RBBP8NLQ8NC74 664 aaPredicted RBP12.91□□□□□ -0.34
CCBE1-203ENST00000589116 BEST2Q8NFU1 509 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 CTNNBL1Q8WYA6 563 aaPredicted RBP12.91□□□□□ -0.34
CCBE1-203ENST00000589116 CALR3Q96L12 384 aaKnown RBP12.91□□□□□ -0.34
CCBE1-203ENST00000589116 BCO2Q9BYV7 579 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 DPP3Q9NY33 737 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 PHF24Q9UPV7 400 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 JRKLQ9Y4A0 524 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 PCDHGC5Q9Y5F6 944 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 MRFAP1Q9Y605 127 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 SQORQ9Y6N5 450 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 MYH10P35580 1976 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 A0A1W2PQ45 241 aaPredicted RBP12.9□□□□□ -0.34
CCBE1-203ENST00000589116 A0A1W2PQY0 241 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 KBTBD13C9JR72 458 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 MMEP08473 750 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 CTSHP09668 335 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 POLR2BP30876 1174 aaKnown RBP12.9□□□□□ -0.34
CCBE1-203ENST00000589116 THPOP40225 353 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 ASPAP45381 313 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 ZBTB6Q15916 424 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 TWF2Q6IBS0 349 aaKnown RBP12.9□□□□□ -0.34
CCBE1-203ENST00000589116 PPP1R2P3Q6NXS1 205 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 TRIM72Q6ZMU5 477 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 TTC39CQ8N584 583 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 USP38Q8NB14 1042 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 RFFLQ8WZ73 363 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 CYP3A43Q9HB55 503 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 STARD7Q9NQZ5 370 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 SALL4Q9UJQ4 1053 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 UBQLN1Q9UMX0 589 aaKnown RBP12.9□□□□□ -0.34
CCBE1-203ENST00000589116 ST3GAL5Q9UNP4 418 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 IPPQ9Y573 584 aa12.9□□□□□ -0.34
CCBE1-203ENST00000589116 UQCRHLA0A096LP55 91 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 SLU7O95391 586 aaKnown RBP12.89□□□□□ -0.35
CCBE1-203ENST00000589116 UQCRHP07919 91 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 KCNE1P15382 129 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 GNA15P30679 374 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 NAP1L1P55209 391 aaKnown RBP12.89□□□□□ -0.35
CCBE1-203ENST00000589116 AMPD2Q01433 879 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 TRIM71Q2Q1W2 868 aaKnown RBP12.89□□□□□ -0.35
CCBE1-203ENST00000589116 FBXO47Q5MNV8 452 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 TAF3Q5VWG9 929 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 PAPD7Q5XG87 772 aaKnown RBP12.89□□□□□ -0.35
CCBE1-203ENST00000589116 PALB2Q86YC2 1186 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 LRRC52Q8N7C0 313 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 SMG8Q8ND04 991 aaKnown RBP12.89□□□□□ -0.35
CCBE1-203ENST00000589116 PCDHB18PQ96TA0 734 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 CISHQ9NSE2 258 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 TRMT13Q9NUP7 481 aaKnown RBP12.89□□□□□ -0.35
CCBE1-203ENST00000589116 CDC23Q9UJX2 597 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 AGAP1Q9UPQ3 857 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 HES2Q9Y543 173 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.89□□□□□ -0.35
CCBE1-203ENST00000589116 BUB1O43683 1085 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 CD4P01730 458 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 CYP3A5P20815 502 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 RAB27AP51159 221 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 MYO1EQ12965 1108 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 TCEAL1Q15170 157 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 CLEC16AQ2KHT3 1053 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 WDR72Q3MJ13 1102 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 SCARA3Q6AZY7 606 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCBE1-203ENST00000589116 RHOT2Q8IXI1 618 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 HPDLQ96IR7 371 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 ZMAT2Q96NC0 199 aaKnown RBP12.89□□□□□ -0.35
CCBE1-203ENST00000589116 TRAIPQ9BWF2 469 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 ERVK-5Q9HDB9 667 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 ACP6Q9NPH0 428 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 TAS2R14Q9NYV8 317 aa12.89□□□□□ -0.35
CCBE1-203ENST00000589116 TMCO5BA8MYB1 307 aa12.88□□□□□ -0.35
CCBE1-203ENST00000589116 DNM1LO00429 736 aa12.88□□□□□ -0.35
CCBE1-203ENST00000589116 CTIFO43310 598 aaKnown RBP12.88□□□□□ -0.35
CCBE1-203ENST00000589116 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
CCBE1-203ENST00000589116 ZSCAN20P17040 1043 aaPredicted RBP12.88□□□□□ -0.35
CCBE1-203ENST00000589116 HADHBP55084 474 aaKnown RBP12.88□□□□□ -0.35
CCBE1-203ENST00000589116 NFX1Q12986 1120 aaKnown RBP12.88□□□□□ -0.35
CCBE1-203ENST00000589116 PAK2Q13177 524 aa12.88□□□□□ -0.35
CCBE1-203ENST00000589116 WHAMMP3Q1A5X7 153 aa12.88□□□□□ -0.35
CCBE1-203ENST00000589116 ACAD10Q6JQN1 1059 aa12.88□□□□□ -0.35
CCBE1-203ENST00000589116 GPR153Q6NV75 609 aa12.88□□□□□ -0.35
CCBE1-203ENST00000589116 Q7L0L9 218 aa12.88□□□□□ -0.35
CCBE1-203ENST00000589116 TRIM11Q96F44 468 aa12.88□□□□□ -0.35
CCBE1-203ENST00000589116 APOL6Q9BWW8 343 aa12.88□□□□□ -0.35
CCBE1-203ENST00000589116 PAK6Q9NQU5 681 aaPredicted RBP12.88□□□□□ -0.35
CCBE1-203ENST00000589116 FAM105AQ9NUU6 356 aa12.88□□□□□ -0.35
CCBE1-203ENST00000589116 NXF1Q9UBU9 619 aaKnown RBP12.88□□□□□ -0.35
CCBE1-203ENST00000589116 PARP2Q9UGN5 583 aa12.88□□□□□ -0.35
CCBE1-203ENST00000589116 SAR1BQ9Y6B6 198 aa12.88□□□□□ -0.35
CCBE1-203ENST00000589116 SMIM28A0A1B0GU29 152 aa12.87□□□□□ -0.35
CCBE1-203ENST00000589116 ARVCFO00192 962 aa12.87□□□□□ -0.35
CCBE1-203ENST00000589116 TLR3O15455 904 aaKnown RBP12.87□□□□□ -0.35
CCBE1-203ENST00000589116 PALMO75781 387 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms