RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 DNAI2Q9GZS0 605 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 PRO3102Q9H379 93 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 DNAJB4Q9UDY4 337 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 ADAM28Q9UKQ2 775 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 DSEQ9UL01 958 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 SIK3Q9Y2K2 1263 aa18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.22■□□□□ 0.51
SCAMP4-211ENST00000588907 TEX33O43247 280 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 TADA2AO75478 443 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 KIF4AO95239 1232 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 TRIM21P19474 475 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 CDC25BP30305 580 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 PBX1P40424 430 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 SLC11A1P49279 550 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 ZNF75DP51815 510 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 WDR72Q3MJ13 1102 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 FIGNQ5HY92 759 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 SPECC1LQ69YQ0 1117 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 CHRDL2Q6WN34 429 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 TMEM86AQ8N2M4 240 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 TOP6BLQ8N6T0 577 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 COLGALT1Q8NBJ5 622 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 TMEM169Q96HH4 297 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 LSM14BQ9BX40 385 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 CYP3A43Q9HB55 503 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 SPG21Q9NZD8 308 aa18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 PRG3Q9Y2Y8 225 aaPredicted RBP18.21■□□□□ 0.51
SCAMP4-211ENST00000588907 TPM1P09493 284 aa18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 ODC1P11926 461 aa18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 MFAP3P55082 362 aa18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 SMAD3P84022 425 aaKnown RBP18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 KRT17Q04695 432 aa18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 KCNMA1Q12791 1236 aa18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 VSTM4Q8IW00 320 aa18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 IGSF21Q96ID5 467 aa18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 FAM84AQ96KN4 292 aa18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 SUSD3Q96L08 255 aa18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 PAAF1Q9BRP4 392 aa18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 EDEM3Q9BZQ6 932 aa18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 SCN1AP35498 2009 aa18.2■□□□□ 0.5
SCAMP4-211ENST00000588907 GOLGA6L6A8MZA4 724 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 M0QZQ0 153 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 SYN3O14994 580 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 B4GALT3O60512 393 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 HUS1O60921 280 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 RB1P06400 928 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 SLC9A1P19634 815 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 KLHDC7AQ5VTJ3 777 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 DSTYKQ6XUX3 929 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 SLC39A11Q8N1S5 342 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 PPM1KQ8N3J5 372 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 APPL2Q8NEU8 664 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 PI4K2AQ9BTU6 479 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 OXCT2Q9BYC2 517 aaPredicted RBP18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 FAM207AQ9NSI2 230 aaPredicted RBP18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 MARCH5Q9NX47 278 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 NXF1Q9UBU9 619 aaKnown RBP18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 SNX9Q9Y5X1 595 aa18.19■□□□□ 0.5
SCAMP4-211ENST00000588907 A0A1W2PQJ5 194 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 LINC01553A4QN01 128 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 C5orf67F2Z3F1 127 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 PPEF2O14830 753 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 TACC1O75410 805 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 ADCY5O95622 1261 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 UCHL3P15374 230 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 TYMPP19971 482 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 BMPR1AP36894 532 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 RABGGTBP53611 331 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 CUL2Q13617 745 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 PRPF38BQ5VTL8 546 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 FUT10Q6P4F1 479 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 PDXDC1Q6P996 788 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 METTL23Q86XA0 190 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 C3orf58Q8NDZ4 430 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 SENP8Q96LD8 212 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 TGS1Q96RS0 853 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 MMS19Q96T76 1030 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 BCO2Q9BYV7 579 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 NUCKS1Q9H1E3 243 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 CEP72Q9P209 647 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 MYO6Q9UM54 1294 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 PCDHB8Q9UN66 801 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 KIAA1671Q9BY89 1806 aa18.18■□□□□ 0.5
SCAMP4-211ENST00000588907 RANBP2P49792 3224 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 CYB561D2O14569 222 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 AP5Z1O43299 807 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 CYP11A1P05108 521 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 CA3P07451 260 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 CTNNB1P35222 781 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 ASPAP45381 313 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 PLCB3Q01970 1234 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 UBE3AQ05086 875 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 BMS1Q14692 1282 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 FAM109BQ6ICB4 259 aaPredicted RBP18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 PHLDB3Q6NSJ2 640 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 CACNA2D4Q7Z3S7 1137 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 GPR65Q8IYL9 337 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 ZNF397Q8NF99 534 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms