RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 SLC7A3Q8WY07 619 aa7.78□□□□□ -1.16
TPM4-210ENST00000588507 EZH1Q92800 747 aaPredicted RBP7.78□□□□□ -1.16
TPM4-210ENST00000588507 FAM20AQ96MK3 541 aa7.78□□□□□ -1.16
TPM4-210ENST00000588507 ASAH2Q9NR71 780 aa7.78□□□□□ -1.16
TPM4-210ENST00000588507 GKN1Q9NS71 199 aa7.78□□□□□ -1.16
TPM4-210ENST00000588507 MMP17Q9ULZ9 603 aa7.78□□□□□ -1.16
TPM4-210ENST00000588507 MYLKQ15746 1914 aa7.78□□□□□ -1.16
TPM4-210ENST00000588507 PLXND1Q9Y4D7 1925 aa7.78□□□□□ -1.16
TPM4-210ENST00000588507 BSNQ9UPA5 3926 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 IGKV6D-21A0A0A0MT36 114 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 TRIM6-TRIM34B2RNG4 842 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 M0R2C6 588 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 ATG7O95352 703 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 FAM87AP0C7U9 286 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 ITGA4P13612 1032 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 U2AF2P26368 475 aaKnown RBP eCLIP7.77□□□□□ -1.173e-8■□□□□ 9.8
TPM4-210ENST00000588507 GRK6P43250 576 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 MCM2P49736 904 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 EPHA5P54756 1037 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 HLA-BQ31612 363 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 EML3Q32P44 896 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 ARL13BQ3SXY8 428 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 ASPRV1Q53RT3 343 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 SYCP2LQ5T4T6 812 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 MAMDC2Q7Z304 686 aaPredicted RBP7.77□□□□□ -1.17
TPM4-210ENST00000588507 LSMEM2Q8N112 164 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 CACTIN-AS1Q8N1I8 211 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 PGBD3Q8N328 593 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 LRRC71Q8N4P6 559 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 SHKBP1Q8TBC3 707 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 APPBP2Q92624 585 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 RABGGTAQ92696 567 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 EXTL1Q92935 676 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 HSPA12BQ96MM6 686 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 INO80BQ9C086 356 aaPredicted RBP7.77□□□□□ -1.17
TPM4-210ENST00000588507 SLC25A18Q9H1K4 315 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 IL1RAPL2Q9NP60 686 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 TOMM22Q9NS69 142 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 MIOSQ9NXC5 875 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 FTSJ1Q9UET6 329 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 CDY1Q9Y6F8 540 aa7.77□□□□□ -1.17
TPM4-210ENST00000588507 FN1P02751 2386 aaKnown RBP7.77□□□□□ -1.17
TPM4-210ENST00000588507 CELSR1Q9NYQ6 3014 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 CRYBG3Q68DQ2 2970 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 A0A087X0B3 334 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 A0A1B0GTW7 788 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 ARL5CA6NH57 179 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 OTOL1A6NHN0 477 aaPredicted RBP7.76□□□□□ -1.17
TPM4-210ENST00000588507 ZBTB5O15062 677 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 RFPL3O75679 317 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 GLDCP23378 1020 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 SREBF1P36956 1147 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 CASRP41180 1078 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 SCNN1GP51170 649 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 ERVPABLB-1P60509 514 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 CDC42EP1Q00587 391 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 SRSF11Q05519 484 aaKnown RBP7.76□□□□□ -1.17
TPM4-210ENST00000588507 HSP90AA2PQ14568 343 aaPredicted RBP7.76□□□□□ -1.17
TPM4-210ENST00000588507 WDR45BQ5MNZ6 344 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 FHL5Q5TD97 284 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 FBXL19Q6PCT2 694 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 TMEM92Q6UXU6 159 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 CATSPER4Q7RTX7 472 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 ATCAYQ86WG3 371 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 PTRH1Q86Y79 214 aaKnown RBP7.76□□□□□ -1.17
TPM4-210ENST00000588507 CKAP2LQ8IYA6 745 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 CCDC33Q8N5R6 958 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 CNNM3Q8NE01 707 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 ZNF461Q8TAF7 563 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 HMGB4Q8WW32 186 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 CD101Q93033 1021 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 FAM83CQ9BQN1 747 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 SDF4Q9BRK5 362 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 HPS4Q9NQG7 708 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 ZNF302Q9NR11 478 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 MTRRQ9UBK8 725 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 CEP131Q9UPN4 1083 aa7.76□□□□□ -1.17
TPM4-210ENST00000588507 U3KPZ7 1027 aaPredicted RBP7.76□□□□□ -1.17
TPM4-210ENST00000588507 TRIM66O15016 1216 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 RECQL4O94761 1208 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 HNRNPLP14866 589 aaKnown RBP eCLIP7.75□□□□□ -1.17
TPM4-210ENST00000588507 ATP5JP18859 108 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 ATP4AP20648 1035 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 MLH1P40692 756 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 ELAVL2Q12926 359 aaKnown RBP7.75□□□□□ -1.17
TPM4-210ENST00000588507 NAA30Q147X3 362 aaPredicted RBP7.75□□□□□ -1.17
TPM4-210ENST00000588507 SF3A1Q15459 793 aaKnown RBP7.75□□□□□ -1.17
TPM4-210ENST00000588507 SGO2Q562F6 1265 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 NAIF1Q69YI7 327 aaPredicted RBP7.75□□□□□ -1.17
TPM4-210ENST00000588507 TCEAL8Q8IYN2 117 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 CLASRPQ8N2M8 674 aaKnown RBP7.75□□□□□ -1.17
TPM4-210ENST00000588507 ZNF564Q8TBZ8 553 aaPredicted RBP7.75□□□□□ -1.17
TPM4-210ENST00000588507 HASPINQ8TF76 798 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 ZNF419Q96HQ0 510 aaPredicted RBP7.75□□□□□ -1.17
TPM4-210ENST00000588507 EBF3Q9H4W6 596 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 CYP4F11Q9HBI6 524 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 TBX20Q9UMR3 447 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 PLAAQ9Y263 795 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 INSL5Q9Y5Q6 135 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 UBIAD1Q9Y5Z9 338 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms