RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TBXAS1P24557 533 aaPredicted RBP12.13□□□□□ -0.47
VMP1-207ENST00000588131 IGFBP6P24592 240 aaPredicted RBP12.13□□□□□ -0.47
VMP1-207ENST00000588131 RAP1GAPP47736 663 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 GRIK3Q13003 919 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 WDR72Q3MJ13 1102 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 ZNF667Q5HYK9 610 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 GLB1LQ6UWU2 654 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 CYP26C1Q6V0L0 522 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 FAM43BQ6ZT52 329 aaPredicted RBP12.13□□□□□ -0.47
VMP1-207ENST00000588131 ENOSF1Q7L5Y1 443 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 TMTC1Q8IUR5 882 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 TMEM199Q8N511 208 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 LRRC52Q8N7C0 313 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 ABHD8Q96I13 439 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 FAM81BQ96LP2 452 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 SMYD3Q9H7B4 428 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 SLC38A7Q9NVC3 462 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 ZNHIT6Q9NWK9 470 aaKnown RBP12.13□□□□□ -0.47
VMP1-207ENST00000588131 ZKSCAN5Q9Y2L8 839 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 R3HCC1Q9Y3T6 440 aaKnown RBP12.13□□□□□ -0.47
VMP1-207ENST00000588131 PCDHB7Q9Y5E2 793 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 SCN1AP35498 2009 aa12.13□□□□□ -0.47
VMP1-207ENST00000588131 CASTOR2A6NHX0 329 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 CYP26A1O43174 497 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 ARHGAP6O43182 974 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 CALCAP01258 141 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 SERPING1P05155 500 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 WEE2P0C1S8 567 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 USP8P40818 1118 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 PRKCIP41743 596 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 CLCNKBP51801 687 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 CDH8P55286 799 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 CDK17Q00537 523 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 IKBKEQ14164 716 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 TDRD12Q587J7 1177 aaKnown RBP12.12□□□□□ -0.47
VMP1-207ENST00000588131 NOMO2Q5JPE7 1267 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 NPAS4Q8IUM7 802 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 FAM71AQ8IYT1 594 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 OLIG1Q8TAK6 271 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 RABGGTAQ92696 567 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 PAAF1Q9BRP4 392 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 BCO2Q9BYV7 579 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 HAUS4Q9H6D7 363 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 NHEJ1Q9H9Q4 299 aaPredicted RBP12.12□□□□□ -0.47
VMP1-207ENST00000588131 ACP6Q9NPH0 428 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 LRFN2Q9ULH4 789 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 COL4A6Q14031 1691 aa12.12□□□□□ -0.47
VMP1-207ENST00000588131 PODXLO00592 558 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 NRDCO43847 1150 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 DDHD2O94830 711 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 KRT5P13647 590 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 CD58P19256 250 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 CLCN1P35523 988 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 EIF4A3P38919 411 aaKnown RBP12.11□□□□□ -0.47
VMP1-207ENST00000588131 TNNC1P63316 161 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 KLHL30Q0D2K2 578 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 MYO1EQ12965 1108 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 TUSC3Q13454 348 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 TOGARAM2Q6ZUX3 1019 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 C16orf59Q7L2K0 433 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 ZNF571Q7Z3V5 609 aaPredicted RBP12.11□□□□□ -0.47
VMP1-207ENST00000588131 ZNF280BQ86YH2 543 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 C17orf53Q8N3J3 647 aaPredicted RBP12.11□□□□□ -0.47
VMP1-207ENST00000588131 C3orf58Q8NDZ4 430 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 URGCPQ8TCY9 931 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 BADQ92934 168 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 JAKMIP2Q96AA8 810 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 ZNF560Q96MR9 790 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 CASD1Q96PB1 797 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 DESI2Q9BSY9 194 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 IL23AQ9NPF7 189 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 CISHQ9NSE2 258 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 TBC1D13Q9NVG8 400 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 PRKAG2Q9UGJ0 569 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 PCDHB4Q9Y5E5 795 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 SNX9Q9Y5X1 595 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 TTC3P53804 2025 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 PTPRSQ13332 1948 aa12.11□□□□□ -0.47
VMP1-207ENST00000588131 FNDC1Q4ZHG4 1894 aaPredicted RBP12.1□□□□□ -0.47
VMP1-207ENST00000588131 ABHD14A-ACY1A0A1B0GW23 586 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 UPP2O95045 317 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 PFKMP08237 780 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 SYN1P17600 705 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 RPL9P32969 192 aaKnown RBP12.1□□□□□ -0.47
VMP1-207ENST00000588131 PNPLA4P41247 253 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 TAF6P49848 677 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 ZNF132P52740 706 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 DEFB103AP81534 67 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 PTK2Q05397 1052 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 DSC1Q08554 894 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 UPP1Q16831 310 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 ASTE1Q2TB18 679 aaPredicted RBP12.1□□□□□ -0.47
VMP1-207ENST00000588131 SV2CQ496J9 727 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 TMEM270Q6UE05 265 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 CD300LGQ6UXG3 332 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 TMCO2Q7Z6W1 182 aaPredicted RBP12.1□□□□□ -0.47
VMP1-207ENST00000588131 NOP9Q86U38 636 aaKnown RBP12.1□□□□□ -0.47
VMP1-207ENST00000588131 SLC47A2Q86VL8 602 aa12.1□□□□□ -0.47
VMP1-207ENST00000588131 RPUSD2Q8IZ73 545 aaKnown RBP12.1□□□□□ -0.47
VMP1-207ENST00000588131 RBBP8NLQ8NC74 664 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms