RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	HSFX1	Q9UBD0	423 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	DDX25	Q9UHL0	483 aa	Known RBP	10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ROBO3	Q96MS0	1386 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PASK	Q96RG2	1323 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077		M0R2N6	131 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TIMM44	O43615	452 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TJP3	O95049	919 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	UCHL3	P15374	230 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	GALK1	P51570	392 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	JAG1	P78504	1218 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	INA	Q16352	499 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SLC35G2	Q8TBE7	412 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SH3GL1	Q99961	368 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CENPK	Q9BS16	269 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	EIF2A	Q9BY44	585 aa	Known RBP	10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	DRC3	Q9H069	523 aa		10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TDRKH	Q9Y2W6	561 aa	Known RBP	10.04	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	NAV1	Q8NEY1	1877 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SPTLC1	O15269	473 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SPAG7	O75391	227 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PDGFRB	P09619	1106 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CETP	P11597	493 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	HTRA3	P83110	453 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	MAP3K10	Q02779	954 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ZNF362	Q5T0B9	420 aa	Predicted RBP	10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PHLDB3	Q6NSJ2	640 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SLFN11	Q7Z7L1	901 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ERO1B	Q86YB8	467 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	GLYCTK	Q8IVS8	523 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TRIM59	Q8IWR1	403 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	KBTBD2	Q8IY47	623 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	LRRC47	Q8N1G4	583 aa	Known RBP	10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	KRT35	Q92764	455 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ARHGEF26	Q96DR7	871 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	MPP4	Q96JB8	637 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CDC42EP4	Q9H3Q1	356 aa	Known RBP	10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SEPT11	Q9NVA2	429 aa	Known RBP	10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	LARS	Q9P2J5	1176 aa	Known RBP	10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ZNF112	Q9UJU3	913 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SSC5D	A1L4H1	1573 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SIGLEC16	A6NMB1	481 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CYTH3	O43739	400 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	EEF2	P13639	858 aa	Known RBP	10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PTPRA	P18433	802 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TAC1	P20366	129 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PPP1R2	P41236	205 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PTGIR	P43119	386 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	NEK3	P51956	506 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CTTN	Q14247	550 aa	Known RBP	10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SEPT7	Q16181	437 aa	Known RBP	10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ECM1	Q16610	540 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TNFAIP8L3	Q5GJ75	292 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CPNE8	Q86YQ8	564 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SLC43A3	Q8NBI5	491 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	STKLD1	Q8NE28	680 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	NCSTN	Q92542	709 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	LRRC37B	Q96QE4	947 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	HAPLN3	Q96S86	360 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SNCAIP	Q9Y6H5	919 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	NUMBL	Q9Y6R0	609 aa		10.03	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TTLL1	O95922	423 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	GSTT2	P0CG29	244 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	GSTT2B	P0CG30	244 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CHKA	P35790	457 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	HAL	P42357	657 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	COASY	Q13057	564 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	MTFR1	Q15390	333 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	LDLRAD1	Q5T700	205 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	RNF43	Q68DV7	783 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	RGMB	Q6NW40	437 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CAPN12	Q6ZSI9	719 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SPATA24	Q86W54	205 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ENDOV	Q8N8Q3	282 aa	Known RBP	10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PRELID2	Q8N945	189 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ACER1	Q8TDN7	264 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	DYDC2	Q96IM9	177 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SPATA17	Q96L03	361 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	MIPEP	Q99797	713 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TMEM260	Q9NX78	707 aa		10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	MTRF1L	Q9UGC7	380 aa	Known RBP	10.02	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CAPN9	O14815	690 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	PDE1B	Q01064	536 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	IK	Q13123	557 aa	Predicted RBP	10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	TRIP13	Q15645	432 aa	Predicted RBP	10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	KYNU	Q16719	465 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	PARP6	Q2NL67	630 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	DEFB115	Q30KQ5	88 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	ZCWPW2	Q504Y3	356 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	SYDE2	Q5VT97	1194 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	AGGF1	Q8N302	714 aa	eCLIP	10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	ZNF280C	Q8ND82	737 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	NAP1L3	Q99457	506 aa	Predicted RBP	10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	VAT1L	Q9HCJ6	419 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	MTMR4	Q9NYA4	1195 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	TAS2R14	Q9NYV8	317 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	WASF2	Q9Y6W5	498 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	TPPP	O94811	219 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	VHL	P40337	213 aa		10.02	□□□□□ -0.81
CACNA2D4-223	ENST00000588077	ECE1	P42892	770 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms