RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 RASA4BC9J798 803 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 RASA4O43374 803 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 CCNE2O96020 404 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 PSAPP07602 524 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 CCND2P30279 289 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 ALDH3A1P30838 453 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 PLA2G4FQ68DD2 849 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 RBM15Q96T37 977 aaKnown RBP eCLIP19.7■□□□□ 0.747e-10■■■■■ 34.5
DDX39A-206ENST00000587730 RMDN3Q96TC7 470 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 ZNF341Q9BYN7 854 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 PITPNM3Q9BZ71 974 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 PXMP2Q9NR77 195 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 ARHGAP28Q9P2N2 729 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 CNTN6Q9UQ52 1028 aa19.7■□□□□ 0.74
DDX39A-206ENST00000587730 IGF2BP3O00425 579 aaKnown RBP eCLIP19.69■□□□□ 0.74
DDX39A-206ENST00000587730 LDHAP00338 332 aaKnown RBP19.69■□□□□ 0.74
DDX39A-206ENST00000587730 EIF2AK2P19525 551 aaKnown RBP19.69■□□□□ 0.74
DDX39A-206ENST00000587730 PIK3CAP42336 1068 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 RPS6P62753 249 aaKnown RBP19.69■□□□□ 0.74
DDX39A-206ENST00000587730 TAP1Q03518 808 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 SPARCL1Q14515 664 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 MORF4L2Q15014 288 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 E2F5Q15329 346 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 ARHGEF16Q5VV41 709 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 SRRM1Q8IYB3 904 aaKnown RBP19.69■□□□□ 0.74
DDX39A-206ENST00000587730 CPA5Q8WXQ8 436 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 MAML1Q92585 1016 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 FAM213AQ9BRX8 229 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 SSU72Q9NP77 194 aaKnown RBP19.69■□□□□ 0.74
DDX39A-206ENST00000587730 FETUBQ9UGM5 382 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 STYXL1Q9Y6J8 313 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 PSME4Q14997 1843 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 EXOC1LA0A1B0GW35 172 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 DNALI1O14645 258 aaPredicted RBP19.69■□□□□ 0.74
DDX39A-206ENST00000587730 DCTN3O75935 186 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 LIG4P49917 911 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 NOMO3P69849 1222 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 MAMLD1Q13495 774 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 PARP6Q2NL67 630 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 EAPPQ56P03 285 aaPredicted RBP19.69■□□□□ 0.74
DDX39A-206ENST00000587730 TAAR1Q96RJ0 339 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 FRMD8P1Q9BZ68 369 aaPredicted RBP19.69■□□□□ 0.74
DDX39A-206ENST00000587730 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.69■□□□□ 0.742e-6■■■■■ 32.7
DDX39A-206ENST00000587730 SLC24A2Q9UI40 661 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 R3HDM2Q9Y2K5 976 aaKnown RBP19.69■□□□□ 0.74
DDX39A-206ENST00000587730 C15orf41Q9Y2V0 281 aa19.69■□□□□ 0.74
DDX39A-206ENST00000587730 UNC5CO95185 931 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 HLA-DRAP01903 254 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 MYCLP12524 364 aaPredicted RBP19.68■□□□□ 0.74
DDX39A-206ENST00000587730 TAC1P20366 129 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 ALDH5A1P51649 535 aaPredicted RBP19.68■□□□□ 0.74
DDX39A-206ENST00000587730 AP3M2P53677 418 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 NFX1Q12986 1120 aaKnown RBP19.68■□□□□ 0.74
DDX39A-206ENST00000587730 CUL2Q13617 745 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 TRIP13Q15645 432 aaPredicted RBP19.68■□□□□ 0.74
DDX39A-206ENST00000587730 PCGF5Q86SE9 256 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 MAB21L3Q8N8X9 362 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 GDAP1Q8TB36 358 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 FEZF2Q8TBJ5 459 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 L3MBTL3Q96JM7 780 aaPredicted RBP19.68■□□□□ 0.74
DDX39A-206ENST00000587730 SGIP1Q9BQI5 828 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 VPS33BQ9H267 617 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 PDLIM7Q9NR12 457 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 DONSONQ9NYP3 566 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 SHOC2Q9UQ13 582 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 USH1CQ9Y6N9 552 aa19.68■□□□□ 0.74
DDX39A-206ENST00000587730 LOC102724159A0A0B4J2E5 919 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 LIASO43766 372 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 HNRNPCL1O60812 293 aaKnown RBP19.67■□□□□ 0.74
DDX39A-206ENST00000587730 STAM2O75886 525 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 LSM8O95777 96 aaKnown RBP19.67■□□□□ 0.74
DDX39A-206ENST00000587730 PIGRP01833 764 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 CALB1P05937 261 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 MSH2P43246 934 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 RASSF2P50749 326 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 YARSP54577 528 aaKnown RBP19.67■□□□□ 0.74
DDX39A-206ENST00000587730 MPP2Q14168 576 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 PWP2Q15269 919 aaKnown RBP19.67■□□□□ 0.74
DDX39A-206ENST00000587730 TRABD2AQ86V40 505 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 AGGF1Q8N302 714 aaeCLIP19.67■□□□□ 0.74
DDX39A-206ENST00000587730 FITM2Q8N6M3 262 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 BSNDQ8WZ55 320 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 SMC6Q96SB8 1091 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 KIFC3Q9BVG8 833 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 DDX56Q9NY93 547 aaKnown RBP19.67■□□□□ 0.74
DDX39A-206ENST00000587730 CTNNAL1Q9UBT7 734 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 RPL26L1Q9UNX3 145 aaKnown RBP19.67■□□□□ 0.74
DDX39A-206ENST00000587730 TESPA1A2RU30 521 aaPredicted RBP19.67■□□□□ 0.74
DDX39A-206ENST00000587730 SMAPO00193 183 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 TLR3O15455 904 aaKnown RBP19.67■□□□□ 0.74
DDX39A-206ENST00000587730 C4BPAP04003 597 aaKnown RBP19.67■□□□□ 0.74
DDX39A-206ENST00000587730 CREB1P16220 341 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 TNNI1P19237 187 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 ACO1P21399 889 aaKnown RBP19.67■□□□□ 0.74
DDX39A-206ENST00000587730 GNA15P30679 374 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 KCNJ2P63252 427 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 P3H1Q32P28 736 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 ZC3H12AQ5D1E8 599 aaKnown RBP19.67■□□□□ 0.74
DDX39A-206ENST00000587730 RTKN2Q8IZC4 609 aa19.67■□□□□ 0.74
DDX39A-206ENST00000587730 INPP5DQ92835 1189 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms