RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 NOP9Q86U38 636 aaKnown RBP12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 LRRC52Q8N7C0 313 aa12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 SLC30A5Q8TAD4 765 aa12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 LNX1Q8TBB1 728 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 PGBD4Q96DM1 585 aa12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 HPDLQ96IR7 371 aa12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 PAWRQ96IZ0 340 aaKnown RBP12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ZFP42Q96MM3 310 aa12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 GAD1Q99259 594 aa12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 HIPK3Q9H422 1215 aa12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 FAM124BQ9H5Z6 455 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 RSAD1Q9HA92 442 aa12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 POLIQ9UNA4 740 aa12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 COL4A6Q14031 1691 aa12.79□□□□□ -0.36
TNFRSF11A-203ENST00000587697 A0A0U1RQJ8 604 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ARL5CA6NH57 179 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 DDX3XO00571 662 aaKnown RBP eCLIP12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 CYP26A1O43174 497 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 IPO7O95373 1038 aaKnown RBP12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 CYP11B1P15538 503 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 CHRNB2P17787 502 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 USP8P40818 1118 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 VAV2P52735 878 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 YWHAEP62258 255 aaKnown RBP12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 CYP27A1Q02318 531 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 SPA17Q15506 151 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 LRRC26Q2I0M4 334 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 SLC24A5Q71RS6 500 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 SLC47A2Q86VL8 602 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 VPS36Q86VN1 386 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 RBBP8NLQ8NC74 664 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 SLC20A1Q8WUM9 679 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ATRIPQ8WXE1 791 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 DDX1Q92499 740 aaKnown RBP12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 APBB2Q92870 758 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 AGPAT1Q99943 283 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 TMEM106CQ9BVX2 250 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 MCOLN1Q9GZU1 580 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 SDCBP2Q9H190 292 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 CYP3A43Q9HB55 503 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 UBN1Q9NPG3 1134 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 SLC38A7Q9NVC3 462 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 PTPRDP23468 1912 aa12.78□□□□□ -0.36
TNFRSF11A-203ENST00000587697 DNAH12Q6ZR08 3092 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 NLRC5Q86WI3 1866 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PJA2O43164 708 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 OFD1O75665 1012 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CLSTN1O94985 981 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 EOMESO95936 686 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CLTBP09497 229 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 KRT5P13647 590 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 P4HA1P13674 534 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PDE6CP51160 858 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CDR2Q01850 454 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 MYO1EQ12965 1108 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TCTN1Q2MV58 587 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 WDR72Q3MJ13 1102 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 SCARA5Q6ZMJ2 495 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 NECAB2Q7Z6G3 386 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 UBE2Q1Q7Z7E8 422 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 DBF4BQ8NFT6 615 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 SEPT8Q92599 483 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ZNF560Q96MR9 790 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 RPS6KC1Q96S38 1066 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 SMYD3Q9H7B4 428 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ACP6Q9NPH0 428 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CISHQ9NSE2 258 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 RNF19AQ9NV58 838 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 MIOSQ9NXC5 875 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 NXF1Q9UBU9 619 aaKnown RBP12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 NAGPAQ9UK23 515 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ATP11BQ9Y2G3 1177 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PCDHB4Q9Y5E5 795 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PCDHA13Q9Y5I0 950 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 VWA8A3KMH1 1905 aa12.77□□□□□ -0.37
TNFRSF11A-203ENST00000587697 RCCD1A6NED2 376 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 THP07101 528 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 WEE2P0C1S8 567 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CYP2C18P33260 490 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PNPLA4P41247 253 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 RAP1GAPP47736 663 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 SCNN1GP51170 649 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 AFF1P51825 1210 aaKnown RBP12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 BPIFB4P59827 614 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 FMO1Q01740 532 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 INCA1Q0VD86 236 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 GRIK3Q13003 919 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 C10orf76Q5T2E6 689 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TMEM270Q6UE05 265 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 KIAA1328Q86T90 577 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ZNF677Q86XU0 584 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PALB2Q86YC2 1186 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 GLYCTKQ8IVS8 523 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 SCLYQ96I15 445 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PPP1R12CQ9BZL4 782 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ELAC1Q9H777 363 aaKnown RBP12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 GOLGA2P5Q9HBQ8 144 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms