RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.25■□□□□ 0.51
VAT1-204ENST00000587147 CXorf38Q8TB03 319 aa18.25■□□□□ 0.51
VAT1-204ENST00000587147 SPATA18Q8TC71 538 aa18.25■□□□□ 0.51
VAT1-204ENST00000587147 NOC3LQ8WTT2 800 aaKnown RBP18.25■□□□□ 0.51
VAT1-204ENST00000587147 DHTKD1Q96HY7 919 aaPredicted RBP18.25■□□□□ 0.51
VAT1-204ENST00000587147 CLSTN3Q9BQT9 956 aa18.25■□□□□ 0.51
VAT1-204ENST00000587147 MKNK1Q9BUB5 465 aa18.25■□□□□ 0.51
VAT1-204ENST00000587147 LMBRD1Q9NUN5 540 aa18.25■□□□□ 0.51
VAT1-204ENST00000587147 KIAA1468Q9P260 1216 aa18.25■□□□□ 0.51
VAT1-204ENST00000587147 GRXCR2A6NFK2 248 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 PSMA7O14818 248 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 IKBKBO14920 756 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 TBC1D4O60343 1298 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 BMP1P13497 986 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 NR2F2P24468 414 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 MORC3Q14149 939 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 ZNF280DQ6N043 979 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 EP400NLQ6ZTU2 488 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 INTS8Q75QN2 995 aaKnown RBP18.24■□□□□ 0.51
VAT1-204ENST00000587147 TMC2Q8TDI7 906 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 PARD3BQ8TEW8 1205 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 B3GALT6Q96L58 329 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 TSG101Q99816 390 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 SFXN1Q9H9B4 322 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 PRKAG3Q9UGI9 489 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 MAN1B1Q9UKM7 699 aa18.24■□□□□ 0.51
VAT1-204ENST00000587147 BARX2Q9UMQ3 279 aaPredicted RBP18.24■□□□□ 0.51
VAT1-204ENST00000587147 R3HCC1Q9Y3T6 440 aaKnown RBP18.24■□□□□ 0.51
VAT1-204ENST00000587147 SCN1AP35498 2009 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 PLXNA3P51805 1871 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 KPNA7A9QM74 516 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 H3BQ06 376 aaPredicted RBP18.23■□□□□ 0.51
VAT1-204ENST00000587147 ITGB3P05106 788 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 TNNI1P19237 187 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 IGFBP6P24592 240 aaPredicted RBP18.23■□□□□ 0.51
VAT1-204ENST00000587147 PSMC2P35998 433 aaKnown RBP18.23■□□□□ 0.51
VAT1-204ENST00000587147 GUCY2FP51841 1108 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 YWHAHQ04917 246 aaPredicted RBP18.23■□□□□ 0.51
VAT1-204ENST00000587147 SMAD2Q15796 467 aaKnown RBP18.23■□□□□ 0.51
VAT1-204ENST00000587147 PTCRAQ6ISU1 281 aaPredicted RBP18.23■□□□□ 0.51
VAT1-204ENST00000587147 LLGL2Q6P1M3 1020 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 PRSS55Q6UWB4 352 aaPredicted RBP18.23■□□□□ 0.51
VAT1-204ENST00000587147 DSTYKQ6XUX3 929 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 C15orf39Q6ZRI6 1047 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 ZC3H3Q8IXZ2 948 aaKnown RBP18.23■□□□□ 0.51
VAT1-204ENST00000587147 RDH13Q8NBN7 331 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 SENP8Q96LD8 212 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 NECTIN4Q96NY8 510 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 MTMR12Q9C0I1 747 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 S1PR5Q9H228 398 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 ADAM7Q9H2U9 754 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 CLSTN2Q9H4D0 955 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 ZDHHC7Q9NXF8 308 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 GDAP2Q9NXN4 497 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 MAPK8IP1Q9UQF2 711 aa18.23■□□□□ 0.51
VAT1-204ENST00000587147 TSC2P49815 1807 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 OR6C75A6NL08 312 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 I3L4J1 428 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 PPEF2O14830 753 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 MBTPS2O43462 519 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 STAU1O95793 577 aaKnown RBP18.22■□□□□ 0.51
VAT1-204ENST00000587147 POU2F2P09086 479 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 EPCAMP16422 314 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 POLR2BP30876 1174 aaKnown RBP18.22■□□□□ 0.51
VAT1-204ENST00000587147 HOXA9P31269 272 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 FKBP3Q00688 224 aaKnown RBP18.22■□□□□ 0.51
VAT1-204ENST00000587147 MYO1EQ12965 1108 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 ADAM9Q13443 819 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 UVSSAQ2YD98 709 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 TPGS2Q68CL5 300 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 CES5AQ6NT32 575 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 SYCE2Q6PIF2 218 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 DPH6Q7L8W6 267 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 SMYD4Q8IYR2 804 aaPredicted RBP18.22■□□□□ 0.51
VAT1-204ENST00000587147 CSGALNACT2Q8N6G5 542 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 SUSD6Q92537 303 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 BORCS6Q96GS4 357 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 FBXW11Q9UKB1 542 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 AGAP1Q9UPQ3 857 aa18.22■□□□□ 0.51
VAT1-204ENST00000587147 BICDL2A1A5D9 508 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 CETN3O15182 167 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 SPTLC1O15269 473 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 SLC16A3O15427 465 aaKnown RBP18.21■□□□□ 0.51
VAT1-204ENST00000587147 TGM5O43548 720 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 FAM163BP0C2L3 166 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 DLATP10515 647 aaKnown RBP18.21■□□□□ 0.51
VAT1-204ENST00000587147 CCNE1P24864 410 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 OR1D2P34982 312 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 TRAPPC11Q7Z392 1133 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 METTL23Q86XA0 190 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 TMEM86AQ8N2M4 240 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 OR5B17Q8NGF7 314 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 ZNF461Q8TAF7 563 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 ERCC4Q92889 916 aaPredicted RBP18.21■□□□□ 0.51
VAT1-204ENST00000587147 CCDC127Q96BQ5 260 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 GZF1Q9H116 711 aaPredicted RBP18.21■□□□□ 0.51
VAT1-204ENST00000587147 MAN1C1Q9NR34 630 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 SIX4Q9UIU6 781 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 FBXL5Q9UKA1 691 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 CDY1Q9Y6F8 540 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms