RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 EPHA5P54756 1037 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 PPP2R3AQ06190 1150 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 ZBTB6Q15916 424 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 KIAA2013Q8IYS2 634 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 SUMF1Q8NBK3 374 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 LEMD2Q8NC56 503 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 BEST2Q8NFU1 509 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 RUBCNQ92622 972 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 AK8Q96MA6 479 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 ZSWIM3Q96MP5 696 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 REEP2Q9BRK0 252 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 TRMT61BQ9BVS5 477 aaKnown RBP21.07■□□□□ 0.96
TRAF4-216ENST00000586813 BRD9Q9H8M2 597 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 ASAH2Q9NR71 780 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 MRPS17Q9Y2R5 130 aaKnown RBP21.07■□□□□ 0.96
TRAF4-216ENST00000586813 YIPF1Q9Y548 306 aa21.07■□□□□ 0.96
TRAF4-216ENST00000586813 NUP210Q8TEM1 1887 aaPredicted RBP21.07■□□□□ 0.96
TRAF4-216ENST00000586813 CACNA1AO00555 2505 aa21.06■□□□□ 0.96
TRAF4-216ENST00000586813 HNRNPDLO14979 420 aaKnown RBP21.06■□□□□ 0.96
TRAF4-216ENST00000586813 FAM189A1O60320 539 aa21.06■□□□□ 0.96
TRAF4-216ENST00000586813 MOSPD3O75425 235 aa21.06■□□□□ 0.96
TRAF4-216ENST00000586813 OAZ2O95190 189 aa21.06■□□□□ 0.96
TRAF4-216ENST00000586813 CYP3A5P20815 502 aa21.06■□□□□ 0.96
TRAF4-216ENST00000586813 CSTF1Q05048 431 aaKnown RBP21.06■□□□□ 0.96
TRAF4-216ENST00000586813 KYAT1Q16773 422 aa21.06■□□□□ 0.96
TRAF4-216ENST00000586813 VITQ6UXI7 678 aa21.06■□□□□ 0.96
TRAF4-216ENST00000586813 SMARCD2Q92925 531 aa21.06■□□□□ 0.96
TRAF4-216ENST00000586813 OXCT2Q9BYC2 517 aaPredicted RBP21.06■□□□□ 0.96
TRAF4-216ENST00000586813 TBX20Q9UMR3 447 aa21.06■□□□□ 0.96
TRAF4-216ENST00000586813 PCDHGA2Q9Y5H1 932 aa21.06■□□□□ 0.96
TRAF4-216ENST00000586813 TIMM13Q9Y5L4 95 aaPredicted RBP21.06■□□□□ 0.96
TRAF4-216ENST00000586813 SPTLC1O15269 473 aa21.05■□□□□ 0.96
TRAF4-216ENST00000586813 SLC26A4O43511 780 aa21.05■□□□□ 0.96
TRAF4-216ENST00000586813 VNN2O95498 520 aa21.05■□□□□ 0.96
TRAF4-216ENST00000586813 MYL4P12829 197 aa21.05■□□□□ 0.96
TRAF4-216ENST00000586813 GJA1P17302 382 aa21.05■□□□□ 0.96
TRAF4-216ENST00000586813 GUCY2FP51841 1108 aa21.05■□□□□ 0.96
TRAF4-216ENST00000586813 FZD5Q13467 585 aa21.05■□□□□ 0.96
TRAF4-216ENST00000586813 ENOX2Q16206 610 aaKnown RBP21.05■□□□□ 0.96
TRAF4-216ENST00000586813 GPBP1Q86WP2 473 aa21.05■□□□□ 0.96
TRAF4-216ENST00000586813 ZSCAN18Q8TBC5 510 aaPredicted RBP21.05■□□□□ 0.96
TRAF4-216ENST00000586813 LRRC15Q8TF66 581 aa21.05■□□□□ 0.96
TRAF4-216ENST00000586813 RMDN1Q96DB5 314 aa21.05■□□□□ 0.96
TRAF4-216ENST00000586813 PGLYRP2Q96PD5 576 aa21.05■□□□□ 0.96
TRAF4-216ENST00000586813 TCHHQ07283 1943 aa21.05■□□□□ 0.96
TRAF4-216ENST00000586813 LACTBL1A8MY62 500 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 K7ENM7 598 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 OGTO15294 1046 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 XPOTO43592 962 aaKnown RBP21.04■□□□□ 0.96
TRAF4-216ENST00000586813 CD2BP2O95400 341 aaKnown RBP21.04■□□□□ 0.96
TRAF4-216ENST00000586813 PIGRP01833 764 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 OR4Q2P0C623 313 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 PSMC3P17980 439 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 SCP2P22307 547 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 USP37Q86T82 979 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 MAP4K3Q8IVH8 894 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 DCLK2Q8N568 766 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 SHKBP1Q8TBC3 707 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 DEPDC1BQ8WUY9 529 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 IRF7Q92985 503 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 CALML4Q96GE6 196 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 BORCS6Q96GS4 357 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 RPF1Q9H9Y2 349 aaKnown RBP21.04■□□□□ 0.96
TRAF4-216ENST00000586813 TRPV4Q9HBA0 871 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 PRMT8Q9NR22 394 aaPredicted RBP21.04■□□□□ 0.96
TRAF4-216ENST00000586813 NCANO14594 1321 aa21.04■□□□□ 0.96
TRAF4-216ENST00000586813 OR6C75A6NL08 312 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 MAN2B1O00754 1011 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 FAM13AO94988 1023 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 GDI1P31150 447 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 UBA7P41226 1012 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 VIPR2P41587 438 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 ZNF131P52739 623 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 PLD1Q13393 1074 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 TEAD2Q15562 447 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 DSTYKQ6XUX3 929 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 ZNF687Q8N1G0 1237 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 MYCT1Q8N699 235 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 ZBTB44Q8NCP5 570 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 ATRIPQ8WXE1 791 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 NELL1Q92832 810 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 TSPAN18Q96SJ8 248 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 CRISPLD1Q9H336 500 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 PARVGQ9HBI0 331 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 ZNF334Q9HCZ1 680 aaPredicted RBP21.03■□□□□ 0.96
TRAF4-216ENST00000586813 TRPV5Q9NQA5 729 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 BLOC1S4Q9NUP1 217 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 ZSCAN32Q9NX65 697 aa21.03■□□□□ 0.96
TRAF4-216ENST00000586813 NDRG2Q9UN36 371 aaKnown RBP21.03■□□□□ 0.96
TRAF4-216ENST00000586813 F5P12259 2224 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 SCN1AP35498 2009 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 PPEF2O14830 753 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 ADRB2P07550 413 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 TYMPP19971 482 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 DUSP4Q13115 394 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 MTAPQ13126 283 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 GPR17Q13304 367 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 DHX8Q14562 1220 aaKnown RBP21.02■□□□□ 0.96
TRAF4-216ENST00000586813 SPATA1Q5VX52 437 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 OVOS1Q6IE37 1185 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms