RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZNF280DQ6N043 979 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 TXNDC11Q6PKC3 985 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 Q6ZS52 159 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 APBB1IPQ7Z5R6 666 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-225ENST00000586385 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 MFSD6LQ8IWD5 586 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 CCDC83Q8IWF9 413 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 TTC9BQ8N6N2 239 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 SNX29Q8TEQ0 813 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 DEPDC1BQ8WUY9 529 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 NTPCRQ9BSD7 190 aaKnown RBP12.99□□□□□ -0.33
BRCA1-225ENST00000586385 RTKNQ9BST9 563 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 IER2Q9BTL4 223 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 PCDHB8Q9UN66 801 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 PCDHB6Q9Y5E3 794 aa12.99□□□□□ -0.33
BRCA1-225ENST00000586385 TIMM13Q9Y5L4 95 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-225ENST00000586385 CHURC1-FNTBB4DL54 471 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 OAZ2O95190 189 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 CXCL8P10145 99 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 SDHBP21912 280 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 TRAPPC10P48553 1259 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 FNTBP49356 437 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 CCR3P51677 355 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 GUCY2FP51841 1108 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 FCHO2Q0JRZ9 810 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 PTGDRQ13258 359 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-225ENST00000586385 PDIA5Q14554 519 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 ZBTB6Q15916 424 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 LAIR1Q6GTX8 287 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 CELF5Q8N6W0 485 aaKnown RBP12.98□□□□□ -0.33
BRCA1-225ENST00000586385 TMEM161BQ8NDZ6 487 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 SECISBP2LQ93073 1101 aaKnown RBP12.98□□□□□ -0.33
BRCA1-225ENST00000586385 ZNF512Q96ME7 567 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-225ENST00000586385 KMT5AQ9NQR1 393 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 ASAH2Q9NR71 780 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 GMEB2Q9UKD1 530 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 MAFFQ9ULX9 164 aa12.98□□□□□ -0.33
BRCA1-225ENST00000586385 A0A1W2PRU2 124 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 TTC26A0AVF1 554 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 PPEF2O14830 753 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 ZNF263O14978 683 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 FAM189A1O60320 539 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 TOM1L1O75674 476 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 SEC24BO95487 1268 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 RETP07949 1114 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 ADRB1P08588 477 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 MAPTP10636 758 aaKnown RBP12.97□□□□□ -0.33
BRCA1-225ENST00000586385 CPB1P15086 417 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 GUCY2CP25092 1073 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 LRPAP1P30533 357 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 CXCL12P48061 93 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 MLLT6P55198 1093 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-225ENST00000586385 MCL1Q07820 350 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 NOLC1Q14978 699 aaKnown RBP eCLIP12.97□□□□□ -0.33
BRCA1-225ENST00000586385 IQCEQ6IPM2 695 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 GAREM2Q75VX8 874 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 SPEM1Q8N4L4 309 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 APPL2Q8NEU8 664 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 PGLYRP2Q96PD5 576 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 PNMA5Q96PV4 448 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 TMEM209Q96SK2 561 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 TCHPQ9BT92 498 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 ANKFY1Q9P2R3 1169 aa12.97□□□□□ -0.33
BRCA1-225ENST00000586385 RBM19Q9Y4C8 960 aaKnown RBP12.97□□□□□ -0.33
BRCA1-225ENST00000586385 TICRRQ7Z2Z1 1910 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 SLC38A8A6NNN8 435 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 SLC30A4O14863 429 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 CHADO15335 359 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 GDF9O60383 454 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 SOAT2O75908 522 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 PAPSS2O95340 614 aaPredicted RBP12.96□□□□□ -0.33
BRCA1-225ENST00000586385 U2AF2P26368 475 aaKnown RBP eCLIP12.96□□□□□ -0.331e-6■■■□□ 19.1
BRCA1-225ENST00000586385 TNFSF9P41273 254 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 NRLP54845 237 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 RAD51AP2Q09MP3 1159 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 DUSP4Q13115 394 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 CENPPQ6IPU0 288 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 PRR23BQ6ZRT6 265 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 ELMOD1Q8N336 334 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 ATAD1Q8NBU5 361 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 LEMD2Q8NC56 503 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 SPIRE2Q8WWL2 714 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 ZFYVE19Q96K21 471 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 DRC1Q96MC2 740 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 LLPHQ9BRT6 129 aaKnown RBP12.96□□□□□ -0.33
BRCA1-225ENST00000586385 C17orf75Q9HAS0 396 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 SEMA4GQ9NTN9 838 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 DNM3Q9UQ16 869 aa12.96□□□□□ -0.33
BRCA1-225ENST00000586385 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-225ENST00000586385 MYBPHLA2RUH7 354 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 MTMR11A4FU01 709 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 PRAMEF12O95522 483 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 PLS3P13797 630 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 CTHP32929 405 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 YWHAHQ04917 246 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-225ENST00000586385 GPR17Q13304 367 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 SIM2Q14190 667 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-225ENST00000586385 HYIQ5T013 277 aa12.95□□□□□ -0.34
BRCA1-225ENST00000586385 PKN3Q6P5Z2 889 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms