RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 FBXL5Q9UKA1 691 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 MUC3AQ02505 3323 aa11.26□□□□□ -0.61
SMARCA4-209ENST00000586122 KLRC4O43908 158 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 GPR37L1O60883 481 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 PRPF40AO75400 957 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 ABLIM3O94929 683 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 CYP11A1P05108 521 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 ATF2P15336 505 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 ELF1P32519 619 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 HOXD13P35453 343 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 ROR1Q01973 937 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 KNOP1Q1ED39 458 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 SV2CQ496J9 727 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 KRBA2Q6ZNG9 492 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 EFCAB13Q8IY85 973 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 LRRC52Q8N7C0 313 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 TMEM174Q8WUU8 243 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 HPS3Q969F9 1004 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 ZNF707Q96C28 371 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 IKZF4Q9H2S9 585 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 AGPAT3Q9NRZ7 376 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 HSPBP1Q9NZL4 362 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 ITGA11Q9UKX5 1188 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 R3HCC1Q9Y3T6 440 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 ZFP37Q9Y6Q3 630 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 CLUHO75153 1309 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 TSC2P49815 1807 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 DOCK6Q96HP0 2047 aa11.25□□□□□ -0.61
SMARCA4-209ENST00000586122 C5orf42Q9H799 3197 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 ADAM12O43184 909 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 TGFB1I1O43294 461 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 RFPL2O75678 378 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 ZNF202O95125 648 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 WEE2P0C1S8 567 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 TMEM191BP0C7N4 346 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 SPATA31D3P0C874 917 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 IGFBP6P24592 240 aaPredicted RBP11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 TFAMQ00059 246 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 MYBPC2Q14324 1141 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 KCNB1Q14721 858 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 PTPN21Q16825 1174 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 KMT5BQ4FZB7 885 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 TMEM31Q5JXX7 168 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 OVOS1Q6IE37 1185 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 SPATA31D4Q6ZUB0 917 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 METTL23Q86XA0 190 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 TCEAL8Q8IYN2 117 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 XXYLT1Q8NBI6 393 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 GLIS3Q8NEA6 775 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 SLC7A14Q8TBB6 771 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 SPATA18Q8TC71 538 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 NXPE3Q969Y0 559 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 ANKRD36BP1Q96IX9 119 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 SENP8Q96LD8 212 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 GTPBP4Q9BZE4 634 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 PCIF1Q9H4Z3 704 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 EPHX3Q9H6B9 360 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 SLC39A2Q9NP94 309 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 TSHZ2Q9NRE2 1034 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 HSFX1Q9UBD0 423 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 AFF4Q9UHB7 1163 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 TECTAO75443 2155 aa11.24□□□□□ -0.61
SMARCA4-209ENST00000586122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 WDR27A2RRH5 827 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 GOLGA8IPA6NC78 632 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 GOLGA8JA6NMD2 632 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 C2CD4DB7Z1M9 353 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 PRRG1O14668 218 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 RHOBTB3O94955 611 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 TNNC2P02585 160 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 RPN1P04843 607 aaKnown RBP11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 CPB1P15086 417 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 CASP1P29466 404 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 GUCY2FP51841 1108 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 RBP5P82980 135 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 SMARCB1Q12824 385 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 DPYDQ12882 1025 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 PLD1Q13393 1074 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 SNRNP35Q16560 246 aaKnown RBP11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 DUOXA2Q1HG44 320 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 RSPO2Q6UXX9 243 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 WDR49Q8IV35 697 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 SLC9A9Q8IVB4 645 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 NELFCDQ8IXH7 590 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 UBALD2Q8IYN6 164 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 GRAMD1CQ8IYS0 662 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 THEM5Q8N1Q8 247 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 KIAA0895Q8NCT3 520 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 EDAQ92838 391 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 CHAMP1Q96JM3 812 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 FNBP1Q96RU3 617 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 GDPD2Q9HCC8 539 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 PDE11AQ9HCR9 933 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 AVENQ9NQS1 362 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 INTS13Q9NVM9 706 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 IGSF9Q9P2J2 1179 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 MUTYHQ9UIF7 546 aa11.23□□□□□ -0.61
SMARCA4-209ENST00000586122 CDH22Q9UJ99 828 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms