RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 HELQQ8TDG4 1101 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 MAIP1Q8WWC4 291 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 ZNF606Q8WXB4 792 aa13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 FEZ2Q9UHY8 353 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-208ENST00000585799 YBX3P16989 372 aaKnown RBP eCLIP13.22□□□□□ -0.298e-7■■□□□ 11.8
SMARCA4-208ENST00000585799 HSPA6P17066 643 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 GBP2P32456 591 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 ZACNQ401N2 412 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 KCNT1Q5JUK3 1230 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 FAM102AQ5T9C2 384 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 APBB1IPQ7Z5R6 666 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 SLC13A5Q86YT5 568 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 RHOT1Q8IXI2 618 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 ACTRT1Q8TDG2 376 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 OSMRQ99650 979 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 GPR20Q99678 358 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 MED10Q9BTT4 135 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 DHX33Q9H6R0 707 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 HES2Q9Y543 173 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 COL4A5P29400 1685 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 MYPNQ86TC9 1320 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 A0A0A6YYK5 440 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 ATP2A1O14983 1001 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 NPTXRO95502 500 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 LGALS2P05162 132 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 C6orf222P0C671 652 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 CYP2C9P11712 490 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 CHRNA3P32297 505 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 CYP2C19P33261 490 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 PPP6R3Q5H9R7 873 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 USP50Q70EL3 339 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 PNMA8AQ86V59 439 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 MCOLN2Q8IZK6 566 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 FBXO25Q8TCJ0 367 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 ZNF516Q92618 1163 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 MFSD14AQ96MC6 490 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 GOLGA6L7A0A1B0GV03 622 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 H7C0C1 242 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 M0QZ92 97 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 MAFO75444 373 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 MAP3K6O95382 1288 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 ADORA2BP29275 332 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 ATP5OP48047 213 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 MAGOHP61326 146 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 TMEM132DQ14C87 1099 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 CLUL1Q15846 466 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 ATP13A4Q4VNC1 1196 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 ZC3H3Q8IXZ2 948 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 KCTD6Q8NC69 237 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 ISCUQ9H1K1 167 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 LTBP3Q9NS15 1303 aa13.22□□□□□ -0.29
SMARCA4-208ENST00000585799 TNPO2O14787 897 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 KIAA0391O15091 583 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 TNFAIP2Q03169 654 aa13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 C12orf56Q8IXR9 622 aa13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 LENG1Q96BZ8 264 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 ERP44Q9BS26 406 aa13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 PARVAQ9NVD7 372 aa13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 PRMT7Q9NVM4 692 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 UTRNP46939 3433 aa13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 F5H423 210 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 PHF2O75151 1096 aa13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 RARBP10826 455 aa13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 KRT3P12035 628 aa13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 MYO1EQ12965 1108 aa13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 B4GALNT4Q76KP1 1039 aa13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 BRSK2Q8IWQ3 736 aa13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 DIS3Q9Y2L1 958 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 MAFBQ9Y5Q3 323 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-208ENST00000585799 COL2A1P02458 1487 aaPredicted RBP13.21□□□□□ -0.3
SMARCA4-208ENST00000585799 MED7O43513 233 aa13.21□□□□□ -0.3
SMARCA4-208ENST00000585799 CHRNB2P17787 502 aa13.21□□□□□ -0.3
SMARCA4-208ENST00000585799 HSD17B3P37058 310 aa13.21□□□□□ -0.3
SMARCA4-208ENST00000585799 GCNT1Q02742 428 aa13.21□□□□□ -0.3
SMARCA4-208ENST00000585799 NFIL3Q16649 462 aa13.21□□□□□ -0.3
SMARCA4-208ENST00000585799 LRRC57Q8N9N7 239 aa13.21□□□□□ -0.3
SMARCA4-208ENST00000585799 HPDLQ96IR7 371 aa13.21□□□□□ -0.3
SMARCA4-208ENST00000585799 CALR3Q96L12 384 aaKnown RBP13.21□□□□□ -0.3
SMARCA4-208ENST00000585799 ERVK-5Q9HDB9 667 aa13.21□□□□□ -0.3
SMARCA4-208ENST00000585799 TCRBV7S2A1N4TA0A589 114 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 BTBD19C9JJ37 291 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 CALB1P05937 261 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 CFHP08603 1231 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 KRT15P19012 456 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 GTF2A2P52657 109 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 C1orf220Q5T0J3 134 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 KIAA0319LQ8IZA0 1049 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 TMEM130Q8N3G9 435 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 AENQ8WTP8 325 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 GRK7Q8WTQ7 553 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 PARK7Q99497 189 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 GCOM2Q9BZD3 368 aaPredicted RBP13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 OSBPL8Q9BZF1 889 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 IKBKGQ9Y6K9 419 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 A0A0B4J269 797 aa13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 A0A0G2JLL6 359 aaPredicted RBP13.2□□□□□ -0.3
SMARCA4-208ENST00000585799 LACTBL1A8MY62 500 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms