RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 LEMD2Q8NC56 503 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 FAM3CQ92520 227 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 OXCT2Q9BYC2 517 aaPredicted RBP15.79■□□□□ 0.12
SDF2-202ENST00000585428 GPR88Q9GZN0 384 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 LMAN1LQ9HAT1 526 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 SH2B1Q9NRF2 756 aaPredicted RBP15.79■□□□□ 0.12
SDF2-202ENST00000585428 NCDNQ9UBB6 729 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 CACNA1AO00555 2505 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 OTOGLQ3ZCN5 2332 aa15.79■□□□□ 0.12
SDF2-202ENST00000585428 CLDN3O15551 220 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 ADRB2P07550 413 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 CHRNB1P11230 501 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 GJA1P17302 382 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 SDHBP21912 280 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 GDI1P31150 447 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 AARSP49588 968 aaKnown RBP eCLIP15.78■□□□□ 0.12
SDF2-202ENST00000585428 SMTNP53814 917 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 ATXN1P54253 815 aaKnown RBP15.78■□□□□ 0.12
SDF2-202ENST00000585428 NRLP54845 237 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 STRN3Q13033 797 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 NOLC1Q14978 699 aaKnown RBP eCLIP15.78■□□□□ 0.12
SDF2-202ENST00000585428 ZSCAN18Q8TBC5 510 aaPredicted RBP15.78■□□□□ 0.12
SDF2-202ENST00000585428 DEPDC1BQ8WUY9 529 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 KCNN1Q92952 543 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 PNMA5Q96PV4 448 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 IER2Q9BTL4 223 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 TUBGCP4Q9UGJ1 667 aa15.78■□□□□ 0.12
SDF2-202ENST00000585428 NDRG2Q9UN36 371 aaKnown RBP15.78■□□□□ 0.12
SDF2-202ENST00000585428 SMG5Q9UPR3 1016 aaKnown RBP15.78■□□□□ 0.12
SDF2-202ENST00000585428 CLTAP09496 248 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 HARSP12081 509 aaKnown RBP15.77■□□□□ 0.12
SDF2-202ENST00000585428 MYL4P12829 197 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 CYP3A5P20815 502 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 SLC12A3P55017 1021 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 YWHAHQ04917 246 aaPredicted RBP15.77■□□□□ 0.12
SDF2-202ENST00000585428 RAD51AP2Q09MP3 1159 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 GPR17Q13304 367 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 TEAD2Q15562 447 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 ARSHQ5FYA8 562 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 CELF5Q8N6W0 485 aaKnown RBP15.77■□□□□ 0.12
SDF2-202ENST00000585428 SHKBP1Q8TBC3 707 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 SECISBP2LQ93073 1101 aaKnown RBP15.77■□□□□ 0.12
SDF2-202ENST00000585428 E2F7Q96AV8 911 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 ASAH2Q9NR71 780 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 KCND2Q9NZV8 630 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 TIMM13Q9Y5L4 95 aaPredicted RBP15.77■□□□□ 0.12
SDF2-202ENST00000585428 PIAS3Q9Y6X2 628 aa15.77■□□□□ 0.12
SDF2-202ENST00000585428 NCANO14594 1321 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 HEPACAM2A8MVW5 462 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 PRR5-ARHGAP8B1AHC4 643 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 ZNF263O14978 683 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 CXCL8P10145 99 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 ARHGAP8P85298 464 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 SPAG1Q07617 926 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 GAS6Q14393 721 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 TMC8Q8IU68 726 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 RSPRY1Q96DX4 576 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 DNAJC25Q9H1X3 360 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 CRISPLD1Q9H336 500 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 ANKFY1Q9P2R3 1169 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 GPR179Q6PRD1 2367 aa15.76■□□□□ 0.11
SDF2-202ENST00000585428 TRIP11Q15643 1979 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 OR6C75A6NL08 312 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 LACTBL1A8MY62 500 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 CHADO15335 359 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 FAM189A1O60320 539 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 OR4Q2P0C623 313 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 CPB1P15086 417 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 CCNE1P24864 410 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 TNFSF9P41273 254 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 NCKAP1LP55160 1127 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 ATP2C1P98194 919 aaPredicted RBP15.75■□□□□ 0.11
SDF2-202ENST00000585428 FCHO2Q0JRZ9 810 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 DUSP4Q13115 394 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 CENPPQ6IPU0 288 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 KIF12Q96FN5 646 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 LRRC3BQ96PB8 259 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 TSPAN18Q96SJ8 248 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 PARD6AQ9NPB6 346 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 UBQLN1Q9UMX0 589 aaKnown RBP15.75■□□□□ 0.11
SDF2-202ENST00000585428 YIPF1Q9Y548 306 aa15.75■□□□□ 0.11
SDF2-202ENST00000585428 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.75■□□□□ 0.11
SDF2-202ENST00000585428 NPHP3-ACAD11A0A0J9YXS1 232 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 A0A1W2PRU2 124 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 PLA2G4BP0C869 781 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 CXCL12P48061 93 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 CCR3P51677 355 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 EPHB3P54753 998 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 LILRA4P59901 499 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 LMNB2Q03252 620 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 MYBPC2Q14324 1141 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 PPP2R5DQ14738 602 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 KYAT1Q16773 422 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 RILPL1Q5EBL4 403 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 GAREM2Q75VX8 874 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 HAUS6Q7Z4H7 955 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 DNAJB7Q7Z6W7 309 aaPredicted RBP15.74■□□□□ 0.11
SDF2-202ENST00000585428 ARID3BQ8IVW6 561 aaPredicted RBP15.74■□□□□ 0.11
SDF2-202ENST00000585428 SPEM1Q8N4L4 309 aa15.74■□□□□ 0.11
SDF2-202ENST00000585428 PGLYRP2Q96PD5 576 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms