RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 PDCD11Q14690 1871 aaKnown RBP13.88□□□□□ -0.19
TRIM47-202ENST00000585333 DNAH12Q6ZR08 3092 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 SF3B1O75533 1304 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRIM47-202ENST00000585333 SLC9A1P19634 815 aa13.87□□□□□ -0.19
TRIM47-202ENST00000585333 OR1G1P47890 313 aa13.87□□□□□ -0.19
TRIM47-202ENST00000585333 KCNMA1Q12791 1236 aa13.87□□□□□ -0.19
TRIM47-202ENST00000585333 CUL2Q13617 745 aa13.87□□□□□ -0.19
TRIM47-202ENST00000585333 DSTYKQ6XUX3 929 aa13.87□□□□□ -0.19
TRIM47-202ENST00000585333 TOP6BLQ8N6T0 577 aa13.87□□□□□ -0.19
TRIM47-202ENST00000585333 APPL2Q8NEU8 664 aa13.87□□□□□ -0.19
TRIM47-202ENST00000585333 LMO3Q8TAP4 145 aa13.87□□□□□ -0.19
TRIM47-202ENST00000585333 SYN2Q92777 582 aaPredicted RBP13.87□□□□□ -0.19
TRIM47-202ENST00000585333 GDF15Q99988 308 aa13.87□□□□□ -0.19
TRIM47-202ENST00000585333 XYLT2Q9H1B5 865 aa13.87□□□□□ -0.19
TRIM47-202ENST00000585333 UBE2TQ9NPD8 197 aaPredicted RBP13.87□□□□□ -0.19
TRIM47-202ENST00000585333 CAPN11Q9UMQ6 739 aa13.87□□□□□ -0.19
TRIM47-202ENST00000585333 TDRD15B5MCY1 1934 aaKnown RBP13.87□□□□□ -0.19
TRIM47-202ENST00000585333 CASTOR2A6NHX0 329 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 AKR1B15C9JRZ8 316 aaPredicted RBP13.86□□□□□ -0.19
TRIM47-202ENST00000585333 SYN3O14994 580 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 TACC1O75410 805 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 TADA2AO75478 443 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 CST3P01034 146 aaPredicted RBP13.86□□□□□ -0.19
TRIM47-202ENST00000585333 STAT1P42224 750 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 CLCNKBP51801 687 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 LILRA4P59901 499 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 POLR2FP61218 127 aaKnown RBP13.86□□□□□ -0.19
TRIM47-202ENST00000585333 KRT17Q04695 432 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 RAB30Q15771 203 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 PRPF38BQ5VTL8 546 aaKnown RBP13.86□□□□□ -0.19
TRIM47-202ENST00000585333 CXorf38Q8TB03 319 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 TMEM169Q96HH4 297 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 MMS19Q96T76 1030 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 PLVAPQ9BX97 442 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 NRDE2Q9H7Z3 1164 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 RC3H2Q9HBD1 1191 aaKnown RBP13.86□□□□□ -0.19
TRIM47-202ENST00000585333 MIOSQ9NXC5 875 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 DNAJC12Q9UKB3 198 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 ADAM28Q9UKQ2 775 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 PLAGL2Q9UPG8 496 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 SSX2IPQ9Y2D8 614 aa13.86□□□□□ -0.19
TRIM47-202ENST00000585333 BZW2Q9Y6E2 419 aaKnown RBP13.86□□□□□ -0.19
TRIM47-202ENST00000585333 A0A1W2PPC1 479 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 AP5Z1O43299 807 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 PTMAP06454 111 aaKnown RBP13.85□□□□□ -0.19
TRIM47-202ENST00000585333 FERP16591 822 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 TYMPP19971 482 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 LHX1P48742 406 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 AARSP49588 968 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRIM47-202ENST00000585333 EPHB4P54760 987 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 CREMQ03060 361 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 SOX4Q06945 474 aaPredicted RBP13.85□□□□□ -0.19
TRIM47-202ENST00000585333 RAPGEF1Q13905 1077 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 PAN2Q504Q3 1202 aaKnown RBP13.85□□□□□ -0.19
TRIM47-202ENST00000585333 VPS36Q86VN1 386 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 UNC93AQ86WB7 457 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 GPR65Q8IYL9 337 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 THEM5Q8N1Q8 247 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 CCDC112Q8NEF3 446 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 OR8K1Q8NGG5 319 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
TRIM47-202ENST00000585333 SEMA4DQ92854 862 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 SUSD3Q96L08 255 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 BCO2Q9BYV7 579 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 GANQ9H2C0 597 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 SPG21Q9NZD8 308 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 NXF1Q9UBU9 619 aaKnown RBP13.85□□□□□ -0.19
TRIM47-202ENST00000585333 KIAA1257Q9ULG3 409 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 PCDHA11Q9Y5I1 949 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 SNX9Q9Y5X1 595 aa13.85□□□□□ -0.19
TRIM47-202ENST00000585333 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.84□□□□□ -0.19
TRIM47-202ENST00000585333 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.84□□□□□ -0.19
TRIM47-202ENST00000585333 H0YGN5 161 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 CYB561D2O14569 222 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 NRP1O14786 923 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 DDHD2O94830 711 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 GALTP07902 379 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 ANXA13P27216 316 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 PCSK1P29120 753 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 KRT9P35527 623 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 BCAR1P56945 870 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 LRMPQ12912 555 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 SFMBT2Q5VUG0 894 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 PHLDB3Q6NSJ2 640 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 FAM117BQ6P1L5 589 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 KCNT2Q6UVM3 1135 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 ZNF280BQ86YH2 543 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 SHC3Q92529 594 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 CLP1Q92989 425 aaKnown RBP13.84□□□□□ -0.19
TRIM47-202ENST00000585333 PDLIM2Q96JY6 352 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 TNIP3Q96KP6 325 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 NAA15Q9BXJ9 866 aaKnown RBP13.84□□□□□ -0.19
TRIM47-202ENST00000585333 TTYH3Q9C0H2 523 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 SNX25Q9H3E2 840 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 GOLGA2P5Q9HBQ8 144 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 SIX2Q9NPC8 291 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
TRIM47-202ENST00000585333 PUF60Q9UHX1 559 aaKnown RBP13.84□□□□□ -0.19
TRIM47-202ENST00000585333 MSRAQ9UJ68 235 aa13.84□□□□□ -0.19
TRIM47-202ENST00000585333 PCDHB8Q9UN66 801 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms