RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 NR3C2P08235 984 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 POTEJP0CG39 1038 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 KCNA2P16389 499 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 CCND2P30279 289 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 LIG4P49917 911 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 COPS2P61201 443 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 KCNJ2P63252 427 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 CUL2Q13617 745 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 BAATQ14032 418 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 SWSAP1Q6NVH7 229 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 PPP1R21Q6ZMI0 780 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 CEP128Q6ZU80 1094 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 PASD1Q8IV76 773 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 RIBC1Q8N443 379 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 ZCCHC9Q8N567 271 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 FITM2Q8N6M3 262 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 RBM15Q96T37 977 aaKnown RBP eCLIP15.06■□□□□ 01e-6■■■□□ 17.1
CDK5RAP3-237ENST00000585163 ATP6V0A4Q9HBG4 840 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 RXFP1Q9HBX9 757 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 CYP26B1Q9NR63 512 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 CTDP1Q9Y5B0 961 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 STYXL1Q9Y6J8 313 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 SCINQ9Y6U3 715 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 PTPRJQ12913 1337 aa15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 TLR3O15455 904 aaKnown RBP15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 CD58P19256 250 aa15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 MAGEA4P43358 317 aa15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 NLRP11P59045 1033 aaKnown RBP15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 STRN3Q13033 797 aa15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 P3H1Q32P28 736 aa15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 CGB2Q6NT52 195 aa15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 RTKN2Q8IZC4 609 aa15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 AGBL3Q8NEM8 1001 aa15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 GIMAP7Q8NHV1 300 aa15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 MAML1Q92585 1016 aa15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 POLR3FQ9H1D9 316 aaPredicted RBP15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 SEPT9Q9UHD8 586 aaPredicted RBP15.05■□□□□ 0
CDK5RAP3-237ENST00000585163 NFASCO94856 1347 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 PSAPP07602 524 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 GNA15P30679 374 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 HSPA1LP34931 641 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 NF2P35240 595 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 ACOT2P49753 483 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 LMNB2Q03252 620 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 MTFR1Q15390 333 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 ZKSCAN8Q15776 578 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 TMEM270Q6UE05 265 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 SEPT14Q6ZU15 432 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 ANKRD35Q8N283 1001 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 APOBEC3GQ9HC16 384 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 ZNF277Q9NRM2 450 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 AGO2Q9UKV8 859 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 CNTN6Q9UQ52 1028 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 RIPK3Q9Y572 518 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 FER1L6Q2WGJ9 1857 aa15.05■□□□□ -0
CDK5RAP3-237ENST00000585163 GSTTP1A0A1W2PQM5 241 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 RASA4BC9J798 803 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 VWA5AO00534 786 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 RASA4O43374 803 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 ALADP13716 330 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 PRKCEQ02156 737 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 C1QBPQ07021 282 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 NFX1Q12986 1120 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 PPP1R2P3Q6NXS1 205 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 GSTA5Q7RTV2 222 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 PRUNE1Q86TP1 453 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 CCDC60Q8IWA6 550 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 GRAMD1AQ96CP6 724 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 USTQ9Y2C2 406 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 TELO2Q9Y4R8 837 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 PCDHB4Q9Y5E5 795 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 KIAA1217Q5T5P2 1943 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 FAM47DPA6NHR8 397 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 RGS20O76081 388 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 TAC1P20366 129 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 ACVR2BQ13705 512 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 RNF43Q68DV7 783 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 MIS18BP1Q6P0N0 1132 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 DRICH1Q6PGQ1 229 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 FEZF2Q8TBJ5 459 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 CCHCR1Q8TD31 782 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 KLHL29Q96CT2 875 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 TBC1D31Q96DN5 1066 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 RMDN2Q96LZ7 410 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 CFAP57Q96MR6 1250 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 RPAP3Q9H6T3 665 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 JPH1Q9HDC5 661 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 ARHGEF3Q9NR81 526 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 RNF146Q9NTX7 359 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 PARVAQ9NVD7 372 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 KLHL14Q9P2G3 628 aa15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 SCAF8Q9UPN6 1271 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-237ENST00000585163 IGF2BP3O00425 579 aaKnown RBP eCLIP15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 LIASO43766 372 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 GJC1P36383 396 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 CETN2P41208 172 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 SSR1P43307 286 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 ALDH5A1P51649 535 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 ADCY1Q08828 1119 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 NR1H3Q13133 447 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms