RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SCFD2Q8WU76 684 aa11.98□□□□□ -0.49
TOP3A-217ENST00000584582 PRMT1Q99873 361 aaKnown RBP11.98□□□□□ -0.49
TOP3A-217ENST00000584582 STMN4Q9H169 189 aaPredicted RBP11.98□□□□□ -0.49
TOP3A-217ENST00000584582 CTNNAL1Q9UBT7 734 aa11.98□□□□□ -0.49
TOP3A-217ENST00000584582 NRAPQ86VF7 1730 aa11.98□□□□□ -0.49
TOP3A-217ENST00000584582 P4HA2O15460 535 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 CHN1P15882 459 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 CHRNB2P17787 502 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 MUTP22033 750 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 NAMPTP43490 491 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 PTENP60484 403 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 PLCB4Q15147 1175 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 CLEC16AQ2KHT3 1053 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 DCAF12L1Q5VU92 463 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 ABHD15Q6UXT9 468 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 NIPA1Q7RTP0 329 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 TMC3Q7Z5M5 1100 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 ANKRD13AQ8IZ07 590 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 GRK7Q8WTQ7 553 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 LBHD1Q9BQE6 289 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-217ENST00000584582 TMEM121Q9BTD3 319 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 IQCGQ9H095 443 aaKnown RBP11.97□□□□□ -0.49
TOP3A-217ENST00000584582 HESX1Q9UBX0 185 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 AFG3L2Q9Y4W6 797 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 COL22A1Q8NFW1 1626 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-217ENST00000584582 USP2O75604 605 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-217ENST00000584582 GCLCP48506 637 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-217ENST00000584582 WNT7BP56706 349 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 PRAMEF19Q5SWL8 479 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 DARS2Q6PI48 645 aaKnown RBP11.97□□□□□ -0.49
TOP3A-217ENST00000584582 SLC9A9Q8IVB4 645 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 ZNF516Q92618 1163 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 SPON1Q9HCB6 807 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 GINM1Q9NU53 330 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 GPATCH2LQ9NWQ4 482 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 TOM1L1O75674 476 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 CLTAP09496 248 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 HSPA6P17066 643 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 GARTP22102 1010 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 ADCYAP1R1P41586 468 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 NCKAP1LP55160 1127 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 C4orf33Q8N1A6 199 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 NETO2Q8NC67 525 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 TCP11Q8WWU5 503 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 TRIM11Q96F44 468 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 BORCS6Q96GS4 357 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 TIPINQ9BVW5 301 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 PORCNQ9H237 461 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 PARVAQ9NVD7 372 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 RGS17Q9UGC6 210 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-217ENST00000584582 BAIAP2L1Q9UHR4 511 aa11.97□□□□□ -0.49
TOP3A-217ENST00000584582 ARAP2Q8WZ64 1704 aa11.96□□□□□ -0.49
TOP3A-217ENST00000584582 GMNCA6NCL1 334 aa11.96□□□□□ -0.49
TOP3A-217ENST00000584582 SPATA31C2B4DYI2 1134 aa11.96□□□□□ -0.49
TOP3A-217ENST00000584582 NEBLO76041 1014 aa11.96□□□□□ -0.49
TOP3A-217ENST00000584582 BRAFP15056 766 aa11.96□□□□□ -0.49
TOP3A-217ENST00000584582 ZBTB16Q05516 673 aa11.96□□□□□ -0.49
TOP3A-217ENST00000584582 DHX34Q14147 1143 aaKnown RBP11.96□□□□□ -0.49
TOP3A-217ENST00000584582 ZNF354CQ86Y25 554 aa11.96□□□□□ -0.49
TOP3A-217ENST00000584582 PRM3Q9NNZ6 103 aa11.96□□□□□ -0.49
TOP3A-217ENST00000584582 HOMER3Q9NSC5 361 aa11.96□□□□□ -0.49
TOP3A-217ENST00000584582 R3HDM2Q9Y2K5 976 aaKnown RBP11.96□□□□□ -0.49
TOP3A-217ENST00000584582 SCINQ9Y6U3 715 aa11.96□□□□□ -0.49
TOP3A-217ENST00000584582 A0A0A6YYK5 440 aaPredicted RBP11.96□□□□□ -0.5
TOP3A-217ENST00000584582 FAM187AA6NFU0 413 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 RASA4BC9J798 803 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 RASA4O43374 803 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 CTSHP09668 335 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 GZMAP12544 262 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 TBXAS1P24557 533 aaPredicted RBP11.96□□□□□ -0.5
TOP3A-217ENST00000584582 TAS2R40P59535 323 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 HHATQ5VTY9 493 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 TTC27Q6P3X3 843 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 METTL7BQ6UX53 244 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 PAF1Q8N7H5 531 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 TMC2Q8TDI7 906 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 ZNF473Q8WTR7 871 aaKnown RBP11.96□□□□□ -0.5
TOP3A-217ENST00000584582 MAIP1Q8WWC4 291 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 PPM1EQ8WY54 764 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 CAVIN3Q969G5 261 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 RBM15Q96T37 977 aaKnown RBP eCLIP11.96□□□□□ -0.55e-11■■■■■ 35.8
TOP3A-217ENST00000584582 METTL5Q9NRN9 209 aaKnown RBP11.96□□□□□ -0.5
TOP3A-217ENST00000584582 ECM29Q5VYK3 1845 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 OGTO15294 1046 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 DDX3YO15523 660 aaKnown RBP11.96□□□□□ -0.5
TOP3A-217ENST00000584582 ADCY3O60266 1144 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 CST8O60676 142 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 PHKA2P46019 1235 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 AARSP49588 968 aaKnown RBP eCLIP11.96□□□□□ -0.5
TOP3A-217ENST00000584582 CCNA1P78396 465 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 PDIA2Q13087 525 aaKnown RBP11.96□□□□□ -0.5
TOP3A-217ENST00000584582 SLMAPQ14BN4 828 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 SCARA3Q6AZY7 606 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 ERO1BQ86YB8 467 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 TMEM192Q8IY95 271 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 KCTD17Q8N5Z5 321 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 FEZF2Q8TBJ5 459 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 RNF34Q969K3 372 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 SENP7Q9BQF6 1050 aa11.96□□□□□ -0.5
TOP3A-217ENST00000584582 MED10Q9BTT4 135 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms