RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 CDV3Q9UKY7 258 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 USP18Q9UMW8 372 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 MYH11P35749 1972 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ARHGEF37A1IGU5 675 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SFI1A8K8P3 1242 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PRR5-ARHGAP8B1AHC4 643 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 K7ENM7 598 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PODXLO00592 558 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 MAN2B1O00754 1011 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ZNF197O14709 1029 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 LILRB5O75023 590 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PLS3P13797 630 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ABCD1P33897 745 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 NPTX2P47972 431 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 OSTNP61366 133 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ARHGAP8P85298 464 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 AMPD3Q01432 767 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 LMNB2Q03252 620 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 FZD5Q13467 585 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 FAM78AQ5JUQ0 283 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CYP4A22Q5TCH4 519 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SLC8B1Q6J4K2 584 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 POTEHQ6S545 545 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PDZD4Q76G19 769 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 IQUBQ8NA54 791 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 NELL1Q92832 810 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 DNASE1L2Q92874 299 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 DHX58Q96C10 678 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 TCEAL4Q96EI5 215 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 REEP2Q9BRK0 252 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 TCHPQ9BT92 498 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 TRMT61BQ9BVS5 477 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 MRPL4Q9BYD3 311 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CUEDC2Q9H467 287 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PARVGQ9HBI0 331 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PRMT8Q9NR22 394 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SLC38A7Q9NVC3 462 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 GMEB2Q9UKD1 530 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 COL4A3Q01955 1670 aa14.29□□□□□ -0.12
CDK5RAP3-234ENST00000584525 NPHP3-ACAD11A0A0J9YXS1 232 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 WDR27A2RRH5 827 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 H7C4K7 107 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SLC16A4O15374 487 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ABLIM3O94929 683 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 IDEP14735 1019 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ATF2P15336 505 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 GRM5P41594 1212 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SOX4Q06945 474 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PPP2R5DQ14738 602 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PRSS36Q5K4E3 855 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 IQCEQ6IPM2 695 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 USP49Q70CQ1 688 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 DYMQ7RTS9 669 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CEP57L1Q8IYX8 460 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ELMOD1Q8N336 334 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CCDC34Q96HJ3 373 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CNTNAP3BQ96NU0 1288 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 FAM126AQ9BYI3 521 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CNTNAP3Q9BZ76 1288 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 BLOC1S4Q9NUP1 217 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 RAB23Q9ULC3 237 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 TNFSF13BQ9Y275 285 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 NUB1Q9Y5A7 615 aa14.28□□□□□ -0.12
CDK5RAP3-234ENST00000584525 DOCK8Q8NF50 2099 aa14.27□□□□□ -0.12
CDK5RAP3-234ENST00000584525 DCDC2BA2VCK2 349 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 SHISA7A6NL88 538 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 SYN3O14994 580 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 MICAL2O94851 1124 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 SEC24AO95486 1093 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 SCP2P22307 547 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 FCARP24071 287 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 GDI1P31150 447 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 NRLP54845 237 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 LPAL2Q16609 132 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 ZNF568Q3ZCX4 644 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 CTXN3Q4LDR2 81 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 ALKAL1Q6UXT8 129 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 TCEAL8Q8IYN2 117 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 CEP120Q8N960 986 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 SPIRE2Q8WWL2 714 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 FAM3CQ92520 227 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 IRF7Q92985 503 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 ZNF512Q96ME7 567 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 ZSWIM3Q96MP5 696 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 ACO2Q99798 780 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 CDT1Q9H211 546 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 TMEM134Q9H6X4 195 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 LMAN1LQ9HAT1 526 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 RCOR1Q9UKL0 485 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 PCDHA7Q9UN72 937 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 INSL5Q9Y5Q6 135 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 CEP250Q9BV73 2442 aa14.27□□□□□ -0.13
CDK5RAP3-234ENST00000584525 TRAK2O60296 914 aa14.26□□□□□ -0.13
CDK5RAP3-234ENST00000584525 HARSP12081 509 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-234ENST00000584525 GAP43P17677 238 aa14.26□□□□□ -0.13
CDK5RAP3-234ENST00000584525 PSMC3P17980 439 aa14.26□□□□□ -0.13
CDK5RAP3-234ENST00000584525 VIPR2P41587 438 aa14.26□□□□□ -0.13
CDK5RAP3-234ENST00000584525 CCR2P41597 374 aa14.26□□□□□ -0.13
CDK5RAP3-234ENST00000584525 XKR4Q5GH76 650 aa14.26□□□□□ -0.13
CDK5RAP3-234ENST00000584525 CCDC65Q8IXS2 484 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms