RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 PDILTQ8N807 584 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 ZNF461Q8TAF7 563 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 TCHPQ9BT92 498 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 BCO2Q9BYV7 579 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 HAPLN2Q9GZV7 340 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 SCAND2PQ9GZW5 306 aaPredicted RBP17.06■□□□□ 0.32
SKA2-209ENST00000583976 SLC38A7Q9NVC3 462 aa17.06■□□□□ 0.32
SKA2-209ENST00000583976 SLC26A4O43511 780 aa17.05■□□□□ 0.32
SKA2-209ENST00000583976 PLA2G4BP0C869 781 aa17.05■□□□□ 0.32
SKA2-209ENST00000583976 ATF2P15336 505 aa17.05■□□□□ 0.32
SKA2-209ENST00000583976 GJA1P17302 382 aa17.05■□□□□ 0.32
SKA2-209ENST00000583976 PFKPQ01813 784 aa17.05■□□□□ 0.32
SKA2-209ENST00000583976 MRPL58Q14197 206 aaKnown RBP17.05■□□□□ 0.32
SKA2-209ENST00000583976 SLC10A6Q3KNW5 377 aa17.05■□□□□ 0.32
SKA2-209ENST00000583976 CTXN3Q4LDR2 81 aa17.05■□□□□ 0.32
SKA2-209ENST00000583976 FAM78AQ5JUQ0 283 aa17.05■□□□□ 0.32
SKA2-209ENST00000583976 RRAGBQ5VZM2 374 aa17.05■□□□□ 0.32
SKA2-209ENST00000583976 SUMF1Q8NBK3 374 aa17.05■□□□□ 0.32
SKA2-209ENST00000583976 TMEM161BQ8NDZ6 487 aa17.05■□□□□ 0.32
SKA2-209ENST00000583976 SUSD3Q96L08 255 aa17.05■□□□□ 0.32
SKA2-209ENST00000583976 AVENQ9NQS1 362 aaPredicted RBP17.05■□□□□ 0.32
SKA2-209ENST00000583976 A0A087X0B3 334 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 LAMTOR5O43504 91 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 MOSPD3O75425 235 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 VNN2O95498 520 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 OR4Q2P0C623 313 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 MAPTP10636 758 aaKnown RBP17.04■□□□□ 0.32
SKA2-209ENST00000583976 GUCY2CP25092 1073 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 ELF1P32519 619 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 GUCY2FP51841 1108 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 TWF1Q12792 350 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 MCM6Q14566 821 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 ZBTB41Q5SVQ8 909 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 ZNF280DQ6N043 979 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 TCEAL8Q8IYN2 117 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 SYT2Q8N9I0 419 aaPredicted RBP17.04■□□□□ 0.32
SKA2-209ENST00000583976 DDX12PQ92771 950 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 ZSWIM3Q96MP5 696 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 SEMA4AQ9H3S1 761 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 BLOC1S4Q9NUP1 217 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 GDE1Q9NZC3 331 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 CEP72Q9P209 647 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 TIMM13Q9Y5L4 95 aaPredicted RBP17.04■□□□□ 0.32
SKA2-209ENST00000583976 NCOR2Q9Y618 2525 aa17.04■□□□□ 0.32
SKA2-209ENST00000583976 ANK1P16157 1881 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 F5P12259 2224 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 MED19A0JLT2 244 aaPredicted RBP17.03■□□□□ 0.32
SKA2-209ENST00000583976 TOM1L1O75674 476 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 PLS3P13797 630 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 CPB1P15086 417 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 PTPN2P17706 415 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 TNFSF9P41273 254 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 STAT6P42226 847 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 SLC12A3P55017 1021 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 FOXK2Q01167 660 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 CSTF1Q05048 431 aaKnown RBP17.03■□□□□ 0.32
SKA2-209ENST00000583976 ADCY1Q08828 1119 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 STRN3Q13033 797 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 RESP18Q5W5W9 173 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 RNF19BQ6ZMZ0 732 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 PDZD4Q76G19 769 aaPredicted RBP17.03■□□□□ 0.32
SKA2-209ENST00000583976 RTL10Q7L3V2 364 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 ERMP1Q7Z2K6 904 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 KCTD17Q8N5Z5 321 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 RAD54LQ92698 747 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 ELSPBP1Q96BH3 223 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 ASB16Q96NS5 453 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 PGLYRP2Q96PD5 576 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 CRISPLD1Q9H336 500 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 FAM13BQ9NYF5 915 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 NDRG2Q9UN36 371 aaKnown RBP17.03■□□□□ 0.32
SKA2-209ENST00000583976 YIPF1Q9Y548 306 aa17.03■□□□□ 0.32
SKA2-209ENST00000583976 TCHHQ07283 1943 aa17.02■□□□□ 0.32
SKA2-209ENST00000583976 H7C4K7 107 aa17.02■□□□□ 0.32
SKA2-209ENST00000583976 PPEF2O14830 753 aa17.02■□□□□ 0.32
SKA2-209ENST00000583976 KINO60870 393 aaKnown RBP17.02■□□□□ 0.32
SKA2-209ENST00000583976 MYL4P12829 197 aa17.02■□□□□ 0.32
SKA2-209ENST00000583976 RPL9P32969 192 aaKnown RBP17.02■□□□□ 0.32
SKA2-209ENST00000583976 ADALQ6DHV7 355 aa17.02■□□□□ 0.32
SKA2-209ENST00000583976 VITQ6UXI7 678 aa17.02■□□□□ 0.32
SKA2-209ENST00000583976 CCDC73Q6ZRK6 1079 aa17.02■□□□□ 0.32
SKA2-209ENST00000583976 SPIRE2Q8WWL2 714 aa17.02■□□□□ 0.32
SKA2-209ENST00000583976 LARP4BQ92615 738 aaKnown RBP17.02■□□□□ 0.32
SKA2-209ENST00000583976 RUBCNQ92622 972 aa17.02■□□□□ 0.32
SKA2-209ENST00000583976 DHX58Q96C10 678 aa17.02■□□□□ 0.32
SKA2-209ENST00000583976 OSBPL6Q9BZF3 934 aa17.02■□□□□ 0.32
SKA2-209ENST00000583976 PRMT8Q9NR22 394 aaPredicted RBP17.02■□□□□ 0.32
SKA2-209ENST00000583976 PCDHB8Q9UN66 801 aa17.02■□□□□ 0.32
SKA2-209ENST00000583976 A0A1B0GVL5 298 aa17.01■□□□□ 0.31
SKA2-209ENST00000583976 POLR2DO15514 142 aaKnown RBP17.01■□□□□ 0.31
SKA2-209ENST00000583976 VIPR2P41587 438 aa17.01■□□□□ 0.31
SKA2-209ENST00000583976 MATR3P43243 847 aaKnown RBP eCLIP17.01■□□□□ 0.31
SKA2-209ENST00000583976 MCL1Q07820 350 aa17.01■□□□□ 0.31
SKA2-209ENST00000583976 FZD5Q13467 585 aa17.01■□□□□ 0.31
SKA2-209ENST00000583976 TEAD2Q15562 447 aa17.01■□□□□ 0.31
SKA2-209ENST00000583976 GPBP1Q86WP2 473 aa17.01■□□□□ 0.31
SKA2-209ENST00000583976 ZNF687Q8N1G0 1237 aa17.01■□□□□ 0.31
SKA2-209ENST00000583976 TTC9BQ8N6N2 239 aa17.01■□□□□ 0.31
SKA2-209ENST00000583976 DNASE1L2Q92874 299 aa17.01■□□□□ 0.31
SKA2-209ENST00000583976 CLDN23Q96B33 292 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms