RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 TDRD15B5MCY1 1934 aaKnown RBP11.78□□□□□ -0.52
TOP3A-216ENST00000583804 LRRC10BA6NIK2 292 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 EPHB6O15197 1021 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 P4HA2O15460 535 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 KIF4AO95239 1232 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 VNN1O95497 513 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 SLC9A1P19634 815 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 DNAJB2P25686 324 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 CDC25BP30305 580 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 BMPR1AP36894 532 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 PNPLA4P41247 253 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 TAF6P49848 677 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 TAP1Q03518 808 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 KCNMA1Q12791 1236 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 MYO1EQ12965 1108 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 GJB7Q6PEY0 223 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 DSTYKQ6XUX3 929 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 CCDC186Q7Z3E2 898 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 TMEM173Q86WV6 379 aaPredicted RBP11.77□□□□□ -0.52
TOP3A-216ENST00000583804 LRRC52Q8N7C0 313 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 C3orf58Q8NDZ4 430 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 CXorf38Q8TB03 319 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 CLP1Q92989 425 aaKnown RBP11.77□□□□□ -0.52
TOP3A-216ENST00000583804 TIFAQ96CG3 184 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 TMEM169Q96HH4 297 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 ZNF560Q96MR9 790 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 ZNF830Q96NB3 372 aaPredicted RBP11.77□□□□□ -0.52
TOP3A-216ENST00000583804 TGS1Q96RS0 853 aaKnown RBP11.77□□□□□ -0.52
TOP3A-216ENST00000583804 PI4K2AQ9BTU6 479 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 CERS4Q9HA82 394 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 RAB20Q9NX57 234 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 SPG21Q9NZD8 308 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.77□□□□□ -0.52
TOP3A-216ENST00000583804 RWDD3Q9Y3V2 267 aa11.77□□□□□ -0.52
TOP3A-216ENST00000583804 CARNS1A5YM72 827 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 I3L4J1 428 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 ITGB1P05556 798 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 PPM1AP35813 382 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 PBX1P40424 430 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 BRCC3P46736 316 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 LILRA4P59901 499 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 SGSM1Q2NKQ1 1148 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 ZNF699Q32M78 642 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 LRIT3Q3SXY7 679 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 SV2CQ496J9 727 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 EPC2Q52LR7 807 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 WDR44Q5JSH3 913 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 SPECC1LQ69YQ0 1117 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 GBP6Q6ZN66 633 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 SPRED2Q7Z698 418 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-216ENST00000583804 SLC39A11Q8N1S5 342 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 KLHL23Q8NBE8 558 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 EHBP1Q8NDI1 1231 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 SEMA4DQ92854 862 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 IGSF21Q96ID5 467 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 IMPG2Q9BZV3 1241 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 INTS2Q9H0H0 1204 aaKnown RBP11.76□□□□□ -0.53
TOP3A-216ENST00000583804 MARCH5Q9NX47 278 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 NXF1Q9UBU9 619 aaKnown RBP11.76□□□□□ -0.53
TOP3A-216ENST00000583804 AJAP1Q9UKB5 411 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-216ENST00000583804 ADAM28Q9UKQ2 775 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 KPNA7A9QM74 516 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 TMEM189-UBE2V1I3L0A0 370 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 SPTLC1O15269 473 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 PMM2O15305 246 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 TRAPPC3O43617 180 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 FGF18O76093 207 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 LINC00271P0C7V0 271 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 ATICP31939 592 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 TERF1P54274 439 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 ADKP55263 362 aaKnown RBP11.76□□□□□ -0.53
TOP3A-216ENST00000583804 ERVK-21P61565 698 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 TNNC1P63316 161 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 KRT17Q04695 432 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 C1QBPQ07021 282 aaKnown RBP11.76□□□□□ -0.53
TOP3A-216ENST00000583804 PDCD11Q14690 1871 aaKnown RBP11.76□□□□□ -0.53
TOP3A-216ENST00000583804 EXOC3L4Q17RC7 722 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 WDR72Q3MJ13 1102 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 TIGD5Q53EQ6 642 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 ZNF667Q5HYK9 610 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 SPOPLQ6IQ16 392 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 CD300LGQ6UXG3 332 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-216ENST00000583804 PPFIBP1Q86W92 1011 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 BCL7CQ8WUZ0 217 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-216ENST00000583804 ARNTL2Q8WYA1 636 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 TAF4BQ92750 862 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 SAMD11Q96NU1 681 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 MMS19Q96T76 1030 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 PLVAPQ9BX97 442 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 XYLT2Q9H1B5 865 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 NLRC4Q9NPP4 1024 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 SIK3Q9Y2K2 1263 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 COQ4Q9Y3A0 265 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 SNX9Q9Y5X1 595 aa11.76□□□□□ -0.53
TOP3A-216ENST00000583804 RANBP2P49792 3224 aaKnown RBP11.75□□□□□ -0.53
TOP3A-216ENST00000583804 GTPBP10A4D1E9 387 aaKnown RBP11.75□□□□□ -0.53
TOP3A-216ENST00000583804 RNF225M0QZC1 329 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-216ENST00000583804 CYB561D2O14569 222 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms