RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 TNFRSF6BO95407 300 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 NDST3O95803 873 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 AMY1AP04745 511 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 ENO2P09104 434 aaPredicted RBP5.66□□□□□ -1.5
SS18-223ENST00000583595 APEX1P27695 318 aaKnown RBP5.66□□□□□ -1.5
SS18-223ENST00000583595 ELF1P32519 619 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 NRG3P56975 720 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 TLE1Q04724 770 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 FOXO1Q12778 655 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 PTK2BQ14289 1009 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 RTP5Q14D33 572 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 NBPF8Q3BBV2 869 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 CCDC178Q5BJE1 867 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 FAM180AQ6UWF9 173 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 GADL1Q6ZQY3 521 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 ZNF761Q86XN6 746 aaPredicted RBP5.66□□□□□ -1.5
SS18-223ENST00000583595 GLB1L2Q8IW92 636 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 ZGPATQ8N5A5 531 aaKnown RBP5.66□□□□□ -1.5
SS18-223ENST00000583595 KYQ8NBH2 561 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 SIMC1Q8NDZ2 872 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 IFI44Q8TCB0 444 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 IPO4Q8TEX9 1081 aaKnown RBP5.66□□□□□ -1.5
SS18-223ENST00000583595 STON2Q8WXE9 905 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 MAML1Q92585 1016 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 MAELQ96JY0 434 aaKnown RBP5.66□□□□□ -1.5
SS18-223ENST00000583595 SNX22Q96L94 193 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 BARD1Q99728 777 aaKnown RBP5.66□□□□□ -1.5
SS18-223ENST00000583595 GDF15Q99988 308 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 C1orf43Q9BWL3 253 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 MRPL46Q9H2W6 279 aaKnown RBP5.66□□□□□ -1.5
SS18-223ENST00000583595 RIC8AQ9NPQ8 531 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 CNNM1Q9NRU3 951 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 RASSF1Q9NS23 344 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 TBC1D23Q9NUY8 699 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 KCMF1Q9P0J7 381 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 AFF4Q9UHB7 1163 aaKnown RBP5.66□□□□□ -1.5
SS18-223ENST00000583595 ASAP1Q9ULH1 1129 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 RPTORQ8N122 1335 aa5.66□□□□□ -1.5
SS18-223ENST00000583595 MYBBP1AQ9BQG0 1328 aaKnown RBP5.66□□□□□ -1.5
SS18-223ENST00000583595 LMTK3Q96Q04 1460 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 A6NLC8 198 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 PIP5K1BO14986 540 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 AREL1O15033 823 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 IRAK2O43187 625 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 NRP2O60462 931 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 CUTAO60888 179 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 ARIH2O95376 493 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 MT-ND5P03915 603 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 PRDX5P30044 214 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 ITGA1P56199 1179 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 PER3P56645 1201 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 NKX3-2P78367 333 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 POU5F1Q01860 360 aaKnown RBP5.65□□□□□ -1.5
SS18-223ENST00000583595 APBA1Q02410 837 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 NUCB1Q02818 461 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 UBE3CQ15386 1083 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 MAN2A1Q16706 1144 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 FAM110CQ1W6H9 321 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 CR1LQ2VPA4 569 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 SLC45A4Q5BKX6 768 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 UBXN11Q5T124 520 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 PHF19Q5T6S3 580 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 AGAP9Q5VTM2 703 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 TEPPQ6URK8 271 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 PROSER1Q86XN7 944 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 COLGALT2Q8IYK4 626 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 TTLL6Q8N841 843 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 ADAMTS17Q8TE56 1095 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 NMD3Q96D46 503 aaKnown RBP5.65□□□□□ -1.5
SS18-223ENST00000583595 IQCDQ96DY2 449 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 TOE1Q96GM8 510 aaKnown RBP5.65□□□□□ -1.5
SS18-223ENST00000583595 PDCD2LQ9BRP1 358 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 UNC45AQ9H3U1 944 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 SMURF2Q9HAU4 748 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 UBN1Q9NPG3 1134 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 DTLQ9NZJ0 730 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 CALCOCO1Q9P1Z2 691 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 FEZ2Q9UHY8 353 aaPredicted RBP5.65□□□□□ -1.5
SS18-223ENST00000583595 DNAI1Q9UI46 699 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 JAG2Q9Y219 1238 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 TMX2Q9Y320 296 aa5.65□□□□□ -1.5
SS18-223ENST00000583595 A0A1W2PR48 441 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 ZNF839A8K0R7 811 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 NT5C1B-RDH14C9J2C7 533 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 F2RL2O00254 374 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 SYT5O00445 386 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 BTN3A1O00481 513 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 HNRNPDLO14979 420 aaKnown RBP5.64□□□□□ -1.51
SS18-223ENST00000583595 TBC1D4O60343 1298 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 LY86O95711 162 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 ANXA2P07355 339 aaKnown RBP5.64□□□□□ -1.51
SS18-223ENST00000583595 RPL13P26373 211 aaKnown RBP5.64□□□□□ -1.51
SS18-223ENST00000583595 PHKA1P46020 1223 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 ARFIP2P53365 341 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 SOX8P57073 446 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 CD83Q01151 205 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 PLP2Q04941 152 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 EXOSC9Q06265 439 aaKnown RBP5.64□□□□□ -1.51
SS18-223ENST00000583595 NFATC3Q12968 1075 aa5.64□□□□□ -1.51
SS18-223ENST00000583595 RAB30Q15771 203 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms