RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 STX6O43752 255 aa22.24■■□□□ 1.15
SHMT1-209ENST00000582653 OAZ2O95190 189 aa22.24■■□□□ 1.15
SHMT1-209ENST00000582653 SLC39A14Q15043 492 aa22.24■■□□□ 1.15
SHMT1-209ENST00000582653 PJA1Q8NG27 643 aa22.24■■□□□ 1.15
SHMT1-209ENST00000582653 ING5Q8WYH8 240 aa22.24■■□□□ 1.15
SHMT1-209ENST00000582653 KXD1Q9BQD3 176 aa22.24■■□□□ 1.15
SHMT1-209ENST00000582653 CORO1BQ9BR76 489 aa22.24■■□□□ 1.15
SHMT1-209ENST00000582653 OXCT2Q9BYC2 517 aaPredicted RBP22.24■■□□□ 1.15
SHMT1-209ENST00000582653 INSL5Q9Y5Q6 135 aa22.24■■□□□ 1.15
SHMT1-209ENST00000582653 A0A087X0B3 334 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 PPEF2O14830 753 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 ABCD1P33897 745 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 ACOT2P49753 483 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 ADCY1Q08828 1119 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 PRSS36Q5K4E3 855 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 JADE1Q6IE81 842 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 SV2BQ7L1I2 683 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 ZNF720Q7Z2F6 126 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 C1orf210Q8IVY1 113 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 ZNF512Q96ME7 567 aaPredicted RBP22.23■■□□□ 1.15
SHMT1-209ENST00000582653 PLA2G2FQ9BZM2 168 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 FOXQ1Q9C009 403 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 SEMA4AQ9H3S1 761 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 ST6GALNAC4Q9H4F1 302 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 ZSCAN16Q9H4T2 348 aaPredicted RBP22.23■■□□□ 1.15
SHMT1-209ENST00000582653 TBC1D7Q9P0N9 293 aa22.23■■□□□ 1.15
SHMT1-209ENST00000582653 VPS13AQ96RL7 3174 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 XPOTO43592 962 aaKnown RBP22.22■■□□□ 1.15
SHMT1-209ENST00000582653 GLULP15104 373 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 TXLNAP40222 546 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 AARSP49588 968 aaKnown RBP eCLIP22.22■■□□□ 1.15
SHMT1-209ENST00000582653 YWHAHQ04917 246 aaPredicted RBP22.22■■□□□ 1.15
SHMT1-209ENST00000582653 MLF2Q15773 248 aaPredicted RBP22.22■■□□□ 1.15
SHMT1-209ENST00000582653 CYP4A22Q5TCH4 519 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 SPATA1Q5VX52 437 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 ADALQ6DHV7 355 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 TANGO2Q6ICL3 276 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 IQCEQ6IPM2 695 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 CD302Q8IX05 232 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 BEST2Q8NFU1 509 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 ELSPBP1Q96BH3 223 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 DNAJC19Q96DA6 116 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 OSBPL6Q9BZF3 934 aa22.22■■□□□ 1.15
SHMT1-209ENST00000582653 CFAP54Q96N23 3096 aa22.21■■□□□ 1.15
SHMT1-209ENST00000582653 NFICP08651 508 aa22.21■■□□□ 1.15
SHMT1-209ENST00000582653 CEBPBP17676 345 aa22.21■■□□□ 1.15
SHMT1-209ENST00000582653 KCNA1Q09470 495 aa22.21■■□□□ 1.15
SHMT1-209ENST00000582653 DSTYKQ6XUX3 929 aa22.21■■□□□ 1.15
SHMT1-209ENST00000582653 RNF19BQ6ZMZ0 732 aa22.21■■□□□ 1.15
SHMT1-209ENST00000582653 ELMOD1Q8N336 334 aa22.21■■□□□ 1.15
SHMT1-209ENST00000582653 TCEAL4Q96EI5 215 aa22.21■■□□□ 1.15
SHMT1-209ENST00000582653 MRPL44Q9H9J2 332 aaKnown RBP22.21■■□□□ 1.15
SHMT1-209ENST00000582653 TFIP11Q9UBB9 837 aaKnown RBP22.21■■□□□ 1.15
SHMT1-209ENST00000582653 PPP1R37O75864 691 aa22.2■■□□□ 1.14
SHMT1-209ENST00000582653 OR4Q2P0C623 313 aa22.2■■□□□ 1.14
SHMT1-209ENST00000582653 CPB1P15086 417 aa22.2■■□□□ 1.14
SHMT1-209ENST00000582653 PAX3P23760 479 aa22.2■■□□□ 1.14
SHMT1-209ENST00000582653 SLFN12LQ6IEE8 588 aa22.2■■□□□ 1.14
SHMT1-209ENST00000582653 CCDC73Q6ZRK6 1079 aa22.2■■□□□ 1.14
SHMT1-209ENST00000582653 PDZD4Q76G19 769 aaPredicted RBP22.2■■□□□ 1.14
SHMT1-209ENST00000582653 USP37Q86T82 979 aa22.2■■□□□ 1.14
SHMT1-209ENST00000582653 NELL2Q99435 816 aa22.2■■□□□ 1.14
SHMT1-209ENST00000582653 STRA6Q9BX79 667 aa22.2■■□□□ 1.14
SHMT1-209ENST00000582653 CEP72Q9P209 647 aa22.2■■□□□ 1.14
SHMT1-209ENST00000582653 AGO2Q9UKV8 859 aaKnown RBP22.2■■□□□ 1.14
SHMT1-209ENST00000582653 STYXL1Q9Y6J8 313 aa22.2■■□□□ 1.14
SHMT1-209ENST00000582653 MYH15Q9Y2K3 1946 aa22.19■■□□□ 1.14
SHMT1-209ENST00000582653 FAM170BA6NMN3 283 aa22.19■■□□□ 1.14
SHMT1-209ENST00000582653 SPTLC1O15269 473 aa22.19■■□□□ 1.14
SHMT1-209ENST00000582653 LRRN2O75325 713 aa22.19■■□□□ 1.14
SHMT1-209ENST00000582653 CCR2P41597 374 aa22.19■■□□□ 1.14
SHMT1-209ENST00000582653 STAT6P42226 847 aa22.19■■□□□ 1.14
SHMT1-209ENST00000582653 NASPP49321 788 aaPredicted RBP22.19■■□□□ 1.14
SHMT1-209ENST00000582653 EPHA5P54756 1037 aa22.19■■□□□ 1.14
SHMT1-209ENST00000582653 LILRA4P59901 499 aa22.19■■□□□ 1.14
SHMT1-209ENST00000582653 TWF1Q12792 350 aa22.19■■□□□ 1.14
SHMT1-209ENST00000582653 FOXD4L5Q5VV16 416 aaPredicted RBP22.19■■□□□ 1.14
SHMT1-209ENST00000582653 PDILTQ8N807 584 aa22.19■■□□□ 1.14
SHMT1-209ENST00000582653 LEMD2Q8NC56 503 aa22.19■■□□□ 1.14
SHMT1-209ENST00000582653 FOXD4L4Q8WXT5 416 aaPredicted RBP22.19■■□□□ 1.14
SHMT1-209ENST00000582653 ZFP14Q9HCL3 533 aa22.19■■□□□ 1.14
SHMT1-209ENST00000582653 MTF2Q9Y483 593 aaPredicted RBP22.19■■□□□ 1.14
SHMT1-209ENST00000582653 MORC2Q9Y6X9 1032 aaPredicted RBP22.19■■□□□ 1.14
SHMT1-209ENST00000582653 SP9P0CG40 484 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 IDEP14735 1019 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 ADSSP30520 456 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 CASP5P51878 434 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 GPR17Q13304 367 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 TMEM132DQ14C87 1099 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 STK38Q15208 465 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 FAM78AQ5JUQ0 283 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 C9orf57Q5W0N0 161 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 CRELD2Q6UXH1 353 aaPredicted RBP22.18■■□□□ 1.14
SHMT1-209ENST00000582653 HS6ST3Q8IZP7 471 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 ADSSL1Q8N142 457 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 LINC00301Q8NCQ3 95 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 POMGNT1Q8WZA1 660 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 SNX21Q969T3 373 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 PGLYRP2Q96PD5 576 aa22.18■■□□□ 1.14
SHMT1-209ENST00000582653 FGFBP2Q9BYJ0 223 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms